About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_011425-T1SYNTAXIN
LLU|FUN_011426-T1
LLU|FUN_011427-T1
LLU|FUN_011428-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_011429-T1
LLU|FUN_011430-T1
LLU|FUN_011431-T1
LLU|FUN_011432-T1T COMPLEX PROTEIN 10
LLU|FUN_011433-T1
LLU|FUN_011434-T1GH02722P
LLU|FUN_011435-T1PEROXISOME ASSEMBLY PROTEIN 12 PEROXIN-12
LLU|FUN_011436-T1ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER
LLU|FUN_011437-T1CHAPERONIN
LLU|FUN_011438-T1CEREBLON
LLU|FUN_011439-T1
LLU|FUN_011440-T1DNAJ HOMOLOG SUBFAMILY B MEMBER 9
LLU|FUN_011441-T1
LLU|FUN_011442-T1
LLU|FUN_011443-T1MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
LLU|FUN_011444-T1
LLU|FUN_011445-T1
LLU|FUN_011446-T1
LLU|FUN_011447-T1
LLU|FUN_011448-T1
LLU|FUN_011449-T1
LLU|FUN_011450-T1
LLU|FUN_011451-T1ZINC FINGER PROTEIN
LLU|FUN_011452-T1DISULFIDE OXIDOREDUCTASE
LLU|FUN_011453-T1OS01G0750732 PROTEIN
LLU|FUN_011454-T1
LLU|FUN_011455-T1BATTENIN
LLU|FUN_011456-T1
LLU|FUN_011457-T1
LLU|FUN_011458-T1
LLU|FUN_011459-T1
LLU|FUN_011460-T1
LLU|FUN_011461-T1
LLU|FUN_011462-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_011463-T1
LLU|FUN_011464-T1
LLU|FUN_011465-T1
LLU|FUN_011466-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_011467-T1
LLU|FUN_011468-T1OS10G0105400 PROTEIN
LLU|FUN_011469-T1
LLU|FUN_011470-T1OS10G0105400 PROTEIN
LLU|FUN_011471-T1PHOSPHOGLYCERATE KINASE
LLU|FUN_011472-T1PHOSPHOGLYCERATE KINASE
LLU|FUN_011473-T1
LLU|FUN_011474-T1
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