About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_010416-T1
LLU|FUN_010417-T1
LLU|FUN_010418-T1
LLU|FUN_010419-T1
LLU|FUN_010420-T1
LLU|FUN_010421-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_010422-T1
LLU|FUN_010423-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_010424-T1CYTOCHROME P450 20A1
LLU|FUN_010425-T1
LLU|FUN_010426-T1LD09343P
LLU|FUN_010427-T1ZGC:174356
LLU|FUN_010428-T1ZGC:174356
LLU|FUN_010429-T1PROTEIN HAPLESS 2
LLU|FUN_010430-T1
LLU|FUN_010431-T1
LLU|FUN_010432-T1
LLU|FUN_010433-T1
LLU|FUN_010434-T1NOTCH LIGAND FAMILY MEMBER
LLU|FUN_010435-T1INTELECTIN
LLU|FUN_010436-T1
LLU|FUN_010437-T1
LLU|FUN_010438-T1
LLU|FUN_010439-T1
LLU|FUN_010440-T1
LLU|FUN_010441-T1
LLU|FUN_010442-T1PROTEIN CBG17025
LLU|FUN_010443-T1
LLU|FUN_010444-T1
LLU|FUN_010445-T1
LLU|FUN_010446-T1
LLU|FUN_010447-T1
LLU|FUN_010448-T1
LLU|FUN_010449-T1ALANYL-TRNA SYNTHETASE
LLU|FUN_010450-T1ATP-BINDING CASSETTE SUB-FAMILY C
LLU|FUN_010451-T1
LLU|FUN_010452-T1ATP-BINDING CASSETTE SUB-FAMILY C
LLU|FUN_010453-T1
LLU|FUN_010454-T1
LLU|FUN_010455-T1E3 UBIQUITIN-PROTEIN LIGASE MIB2
LLU|FUN_010456-T1UNCHARACTERIZED
LLU|FUN_010457-T1
LLU|FUN_010458-T1L-THREONINE ALDOLASE-RELATED
LLU|FUN_010459-T1THYMIDINE KINASE
LLU|FUN_010460-T1
LLU|FUN_010461-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_010462-T1
LLU|FUN_010463-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_010464-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_010465-T1
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