About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_010313-T1
LLU|FUN_010314-T1
LLU|FUN_010315-T1
LLU|FUN_010316-T1PRE-MRNA-PROCESSING PROTEIN PRP40
LLU|FUN_010317-T1
LLU|FUN_010318-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_010319-T1
LLU|FUN_010320-T1ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 6-INTERACTING PROTEIN 6
LLU|FUN_010321-T1
LLU|FUN_010322-T1UNCHARACTERIZED
LLU|FUN_010323-T1BARDET-BIEDL SYNDROME 12 PROTEIN
LLU|FUN_010324-T1GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4 FAMILY
LLU|FUN_010325-T1
LLU|FUN_010326-T1
LLU|FUN_010327-T1PROPERDIN
LLU|FUN_010328-T1DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA
LLU|FUN_010329-T1
LLU|FUN_010330-T1
LLU|FUN_010331-T1
LLU|FUN_010332-T1PROTEIN EVA-1
LLU|FUN_010333-T1PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
LLU|FUN_010334-T1MUCIN 4-RELATED
LLU|FUN_010335-T1
LLU|FUN_010336-T1MUCIN 4-RELATED
LLU|FUN_010337-T1
LLU|FUN_010338-T1
LLU|FUN_010339-T1
LLU|FUN_010340-T1
LLU|FUN_010341-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_010342-T1
LLU|FUN_010343-T1
LLU|FUN_010344-T1BETA TRANSDUCIN-RELATED PROTEIN
LLU|FUN_010345-T1NACHT DOMAIN- AND WD REPEAT-CONTAINING PROTEIN 1
LLU|FUN_010346-T1
LLU|FUN_010347-T1
LLU|FUN_010348-T1
LLU|FUN_010349-T1
LLU|FUN_010350-T1TRANSMEMBRANE PROTEIN 9 FAMILY MEMBER
LLU|FUN_010351-T1NADH-CYTOCHROME B5 REDUCTASE
LLU|FUN_010352-T1
LLU|FUN_010353-T1ADENOSINE DEAMINASE
LLU|FUN_010354-T1
LLU|FUN_010355-T1
LLU|FUN_010356-T1
LLU|FUN_010357-T1OVOCHYMASE-RELATED
LLU|FUN_010358-T1
LLU|FUN_010359-T1
LLU|FUN_010360-T1
LLU|FUN_010361-T1
LLU|FUN_010362-T1
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