About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_009994-T1
LLU|FUN_009995-T1
LLU|FUN_009996-T1
LLU|FUN_009997-T1
LLU|FUN_009998-T1
LLU|FUN_009999-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_010000-T1
LLU|FUN_010001-T1
LLU|FUN_010002-T1CRUMBS FAMILY MEMBER
LLU|FUN_010003-T1LIN-24 (TWENTY-FOUR) LIKE
LLU|FUN_010004-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_010005-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_010006-T1
LLU|FUN_010007-T1
LLU|FUN_010008-T1
LLU|FUN_010009-T1
LLU|FUN_010010-T1
LLU|FUN_010011-T1
LLU|FUN_010012-T1
LLU|FUN_010013-T1
LLU|FUN_010014-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
LLU|FUN_010015-T1
LLU|FUN_010016-T1PROTEIN FAM47B
LLU|FUN_010017-T1UNCHARACTERIZED
LLU|FUN_010018-T1
LLU|FUN_010019-T1
LLU|FUN_010020-T1DNA POLYMERASE EPSILON SUBUNIT B
LLU|FUN_010021-T1
LLU|FUN_010022-T1D-ERYTHRULOSE REDUCTASE
LLU|FUN_010023-T1RNA PROCESSING PROTEIN LD23810P
LLU|FUN_010024-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_010025-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_010026-T1PROTEIN DD3-3
LLU|FUN_010027-T1OS10G0105400 PROTEIN
LLU|FUN_010028-T1OS10G0105400 PROTEIN
LLU|FUN_010029-T1
LLU|FUN_010030-T1OS10G0105400 PROTEIN
LLU|FUN_010031-T1
LLU|FUN_010032-T1OS10G0105400 PROTEIN
LLU|FUN_010033-T1
LLU|FUN_010034-T1HEAT SHOCK PROTEIN HSP-12.2-RELATED
LLU|FUN_010035-T1
LLU|FUN_010036-T1
LLU|FUN_010037-T1
LLU|FUN_010038-T1
LLU|FUN_010039-T1
LLU|FUN_010040-T1
LLU|FUN_010041-T1MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S28
LLU|FUN_010042-T1UNCHARACTERIZED
LLU|FUN_010043-T1
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