About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_009789-T1
LLU|FUN_009790-T1
LLU|FUN_009791-T1TRYPTASE-RELATED
LLU|FUN_009792-T1
LLU|FUN_009793-T1
LLU|FUN_009794-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
LLU|FUN_009795-T1PEPTIDASE
LLU|FUN_009796-T1
LLU|FUN_009797-T1
LLU|FUN_009798-T1
LLU|FUN_009799-T1BTB POZ DOMAIN CONTAINING 7
LLU|FUN_009800-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIII
LLU|FUN_009801-T1S -2-HYDROXY-ACID OXIDASE-RELATED
LLU|FUN_009802-T1S -2-HYDROXY-ACID OXIDASE-RELATED
LLU|FUN_009803-T1
LLU|FUN_009804-T1
LLU|FUN_009805-T1
LLU|FUN_009806-T1EPHRIN TYPE-B RECEPTOR
LLU|FUN_009807-T1
LLU|FUN_009808-T1TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
LLU|FUN_009809-T1MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN
LLU|FUN_009810-T1CYSTEINE PROTEASE FAMILY C1-RELATED
LLU|FUN_009811-T1CYSTEINE PROTEASE FAMILY C1-RELATED
LLU|FUN_009812-T1GUANYL-NUCLEOTIDE EXCHANGE FACTOR
LLU|FUN_009813-T1CYSTEINE PROTEASE FAMILY C1-RELATED
LLU|FUN_009814-T1
LLU|FUN_009815-T1
LLU|FUN_009816-T1CYTOCHROME C OXIDASE SUBUNIT 6C
LLU|FUN_009817-T1
LLU|FUN_009818-T1HOMEOBOX PROTEIN, PUTATIVE-RELATED
LLU|FUN_009819-T1
LLU|FUN_009820-T1ANKYRIN REPEAT AND EF-HAND DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_009821-T1
LLU|FUN_009822-T1UNCHARACTERIZED
LLU|FUN_009823-T1
LLU|FUN_009824-T1NEURALIZED
LLU|FUN_009825-T1UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_009826-T1
LLU|FUN_009827-T1
LLU|FUN_009828-T1NEURALIZED
LLU|FUN_009829-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_009830-T1SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
LLU|FUN_009831-T1SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
LLU|FUN_009832-T1
LLU|FUN_009833-T1
LLU|FUN_009834-T1
LLU|FUN_009835-T1
LLU|FUN_009836-T1
LLU|FUN_009837-T1
LLU|FUN_009838-T1
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