About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_009537-T1
LLU|FUN_009538-T1
LLU|FUN_009539-T1
LLU|FUN_009540-T1DELTA(14)-STEROL REDUCTASE
LLU|FUN_009541-T1DELTA(14)-STEROL REDUCTASE
LLU|FUN_009542-T1CHITINASE
LLU|FUN_009543-T1
LLU|FUN_009544-T1CHITINASE
LLU|FUN_009545-T1ACTIVATOR OF S-PHASE KINASE-RELATED
LLU|FUN_009547-T1
LLU|FUN_009548-T1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
LLU|FUN_009549-T1EPPIN
LLU|FUN_009550-T1WHEY ACDIC PROTEIN WAP
LLU|FUN_009551-T1
LLU|FUN_009552-T1
LLU|FUN_009553-T1HYR DOMAIN-CONTAINING PROTEIN
LLU|FUN_009554-T1HL01030P-RELATED
LLU|FUN_009555-T1
LLU|FUN_009556-T1NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
LLU|FUN_009557-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_009558-T1GLYCOPROTEIN HORMONE RECEPTOR
LLU|FUN_009559-T1GLYCOPROTEIN HORMONE RECEPTOR
LLU|FUN_009560-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_009561-T1
LLU|FUN_009562-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_009563-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_009564-T1
LLU|FUN_009565-T1
LLU|FUN_009566-T1ENDONUCLEASE-RELATED
LLU|FUN_009567-T1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
LLU|FUN_009568-T1
LLU|FUN_009569-T1
LLU|FUN_009570-T1
LLU|FUN_009571-T1
LLU|FUN_009572-T1UNCHARACTERIZED
LLU|FUN_009573-T1HYDROLASE
LLU|FUN_009574-T1UNCHARACTERIZED
LLU|FUN_009575-T1E3 UBIQUITIN-PROTEIN LIGASE RNF165
LLU|FUN_009576-T1GLYCOSYL TRANSFERASE-RELATED
LLU|FUN_009577-T1ZINC FINGER PROTEIN
LLU|FUN_009578-T1
LLU|FUN_009579-T1
LLU|FUN_009580-T1CARNITINE O-ACYLTRANSFERASE
LLU|FUN_009581-T1
LLU|FUN_009582-T1
LLU|FUN_009583-T1
LLU|FUN_009584-T1OSMOSIS RESPONSIVE FACTOR
LLU|FUN_009585-T1
LLU|FUN_009586-T1
LLU|FUN_009587-T1UNCHARACTERIZED
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