About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_009435-T1N-ACETYLGALACTOSAMINYLTRANSFERASE
LLU|FUN_009436-T1
LLU|FUN_009437-T1OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN
LLU|FUN_009438-T1
LLU|FUN_009439-T1OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN
LLU|FUN_009440-T1TRANSLATION FACTOR GUF1-RELATED
LLU|FUN_009441-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_009442-T1GLUTAMATE DECARBOXYLASE-RELATED
LLU|FUN_009443-T1MALATE DEHYDROGENASE
LLU|FUN_009444-T1MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN
LLU|FUN_009445-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_009446-T1METALLO-BETA-LACTAMASE DOMAIN-CONTAINING
LLU|FUN_009447-T1
LLU|FUN_009448-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 13
LLU|FUN_009449-T1ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE
LLU|FUN_009450-T1BETA-1,4-GALACTOSYLTRANSFERASE
LLU|FUN_009451-T1
LLU|FUN_009452-T1
LLU|FUN_009453-T1
LLU|FUN_009454-T1ATP SYNTHASE E CHAIN, MITOCHONDRIAL
LLU|FUN_009455-T1RCG26366
LLU|FUN_009456-T1
LLU|FUN_009457-T1
LLU|FUN_009458-T1
LLU|FUN_009459-T1BONUS, ISOFORM C-RELATED
LLU|FUN_009460-T1
LLU|FUN_009461-T1
LLU|FUN_009462-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_009463-T1
LLU|FUN_009464-T1INVERTED FORMIN-2
LLU|FUN_009465-T1INVERTED FORMIN-2
LLU|FUN_009466-T1
LLU|FUN_009467-T1
LLU|FUN_009469-T1
LLU|FUN_009470-T1
LLU|FUN_009472-T1
LLU|FUN_009473-T1
LLU|FUN_009474-T1UNCHARACTERIZED
LLU|FUN_009475-T1UNCHARACTERIZED
LLU|FUN_009476-T1UNCHARACTERIZED
LLU|FUN_009477-T1GLYCOSYLTRANSFERASE-RELATED
LLU|FUN_009478-T1
LLU|FUN_009479-T1WD-REPEAT PROTEIN-RELATED
LLU|FUN_009480-T1UNCHARACTERIZED
LLU|FUN_009481-T1UNCHARACTERIZED
LLU|FUN_009482-T1
LLU|FUN_009483-T1
LLU|FUN_009484-T1
LLU|FUN_009485-T1
LLU|FUN_009486-T1ROTATIN
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