About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_009487-T1TRANSMEMBRANE PROTEIN 144
LLU|FUN_009488-T1PROTEIN CBG24663
LLU|FUN_009489-T1VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36
LLU|FUN_009490-T1
LLU|FUN_009491-T1
LLU|FUN_009492-T1
LLU|FUN_009493-T1
LLU|FUN_009494-T1
LLU|FUN_009495-T1COMM DOMAIN CONTAINING PROTEIN 5
LLU|FUN_009496-T1RING FINGER PROTEIN 127
LLU|FUN_009497-T1
LLU|FUN_009498-T1
LLU|FUN_009499-T1
LLU|FUN_009500-T1
LLU|FUN_009501-T1
LLU|FUN_009502-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_009503-T1
LLU|FUN_009504-T1
LLU|FUN_009505-T1
LLU|FUN_009506-T1
LLU|FUN_009507-T1
LLU|FUN_009508-T1
LLU|FUN_009509-T1
LLU|FUN_009510-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
LLU|FUN_009511-T1
LLU|FUN_009512-T1ALPHA-1,2 MANNOSYLTRANSFERASE KTR1
LLU|FUN_009513-T1
LLU|FUN_009514-T1RHO FAMILY GTPASE
LLU|FUN_009515-T1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
LLU|FUN_009516-T1
LLU|FUN_009517-T1PYRUVATE KINASE
LLU|FUN_009518-T1
LLU|FUN_009519-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_009520-T1BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER
LLU|FUN_009521-T1BAND 7 PROTEIN-RELATED
LLU|FUN_009522-T1MALE-ENHANCED ANTIGEN-1
LLU|FUN_009523-T1MITOCHONDRIAL RIBOSOMAL PROTEIN L48
LLU|FUN_009524-T1
LLU|FUN_009525-T1HOMOLOC-13
LLU|FUN_009526-T1
LLU|FUN_009527-T1
LLU|FUN_009528-T1
LLU|FUN_009529-T1
LLU|FUN_009530-T1
LLU|FUN_009531-T1
LLU|FUN_009532-T1
LLU|FUN_009533-T1
LLU|FUN_009534-T1
LLU|FUN_009535-T1
LLU|FUN_009536-T1
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