About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_009639-T1ZINC FINGER PROTEIN
LLU|FUN_009640-T1
LLU|FUN_009641-T1
LLU|FUN_009642-T1
LLU|FUN_009643-T1ZINC FINGER PROTEIN
LLU|FUN_009644-T1GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
LLU|FUN_009645-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_009646-T1WNT RELATED
LLU|FUN_009647-T1
LLU|FUN_009648-T1
LLU|FUN_009649-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_009650-T1
LLU|FUN_009651-T1
LLU|FUN_009652-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_009653-T1
LLU|FUN_009654-T1UPF0478 PROTEIN YTXG
LLU|FUN_009655-T1ACTIN FILAMENT-ASSOCIATED PROTEIN 1 FAMILY MEMBER
LLU|FUN_009656-T1
LLU|FUN_009657-T1
LLU|FUN_009658-T1SI:CH211-266K2.1
LLU|FUN_009659-T1BARDET-BIEDL SYNDROME 1 PROTEIN
LLU|FUN_009660-T1USP DOMAIN-CONTAINING PROTEIN
LLU|FUN_009661-T1
LLU|FUN_009662-T1UNCHARACTERIZED
LLU|FUN_009663-T1
LLU|FUN_009664-T1UNCHARACTERIZED
LLU|FUN_009665-T1CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81
LLU|FUN_009666-T1
LLU|FUN_009667-T1
LLU|FUN_009668-T1
LLU|FUN_009669-T1
LLU|FUN_009670-T1
LLU|FUN_009671-T1
LLU|FUN_009672-T1
LLU|FUN_009673-T1
LLU|FUN_009674-T1
LLU|FUN_009675-T1
LLU|FUN_009676-T1
LLU|FUN_009677-T1
LLU|FUN_009678-T1
LLU|FUN_009679-T1
LLU|FUN_009680-T1FANCONI ANEMIA GROUP E PROTEIN
LLU|FUN_009681-T1GH11727P
LLU|FUN_009682-T1
LLU|FUN_009683-T1
LLU|FUN_009684-T1UNCHARACTERIZED
LLU|FUN_009685-T1MACROPHAGE ERYTHROBLAST ATTACHER-RELATED
LLU|FUN_009686-T1CAT EYE SYNDROME CRITICAL REGION PROTEIN 6
LLU|FUN_009687-T1TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
LLU|FUN_009688-T1TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
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