About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_010044-T1
LLU|FUN_010045-T1PHOSPHATE TRANSPORTER
LLU|FUN_010046-T1
LLU|FUN_010047-T1PHOSPHATE TRANSPORTER
LLU|FUN_010048-T1
LLU|FUN_010049-T1FORKHEAD BOX PROTEIN
LLU|FUN_010050-T1
LLU|FUN_010051-T1
LLU|FUN_010052-T1
LLU|FUN_010053-T1PROTEIN SIDEKICK
LLU|FUN_010059-T1
LLU|FUN_010060-T1
LLU|FUN_010061-T1SEGMENTATION PROTEIN EVEN-SKIPPED
LLU|FUN_010071-T1
LLU|FUN_010073-T1SERINE HYDROXYMETHYLTRANSFERASE
LLU|FUN_010074-T1SOLUTE CARRIER FAMILY 35 MEMBER B
LLU|FUN_010075-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_010076-T1PROTEIN NCBP2AS2
LLU|FUN_010077-T15-HYDROXYTRYPTAMINE RECEPTOR
LLU|FUN_010078-T1
LLU|FUN_010079-T1
LLU|FUN_010080-T1
LLU|FUN_010081-T1
LLU|FUN_010082-T1
LLU|FUN_010083-T1
LLU|FUN_010084-T1
LLU|FUN_010085-T1OLIGOPEPTIDE TRANSPORTER-RELATED
LLU|FUN_010086-T1OLIGOPEPTIDE TRANSPORTER-RELATED
LLU|FUN_010087-T1WD40 REPEAT PF20
LLU|FUN_010088-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
LLU|FUN_010089-T1TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
LLU|FUN_010090-T1PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED
LLU|FUN_010091-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_010092-T1
LLU|FUN_010093-T1SERINE/THREONINE-PROTEIN KINASE
LLU|FUN_010094-T1
LLU|FUN_010097-T1
LLU|FUN_010098-T1
LLU|FUN_010099-T1ANGIOTENSIN-CONVERTING ENZYME
LLU|FUN_010100-T1ANGIOTENSIN-CONVERTING ENZYME
LLU|FUN_010101-T1COLLAGEN ALPHA
LLU|FUN_010102-T1HISTIDINE-RICH GLYCOPROTEIN
LLU|FUN_010103-T1
LLU|FUN_010104-T1
LLU|FUN_010105-T1
LLU|FUN_010106-T1HOMEOBOX PROTEIN GBX
LLU|FUN_010107-T1
LLU|FUN_010108-T1IDURONATE 2-SULFATASE
LLU|FUN_010109-T1
LLU|FUN_010110-T1RIBULOSE-5-PHOSPHATE-3-EPIMERASE
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