About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_010213-T1
LLU|FUN_010214-T1
LLU|FUN_010215-T1
LLU|FUN_010216-T1
LLU|FUN_010217-T1INTERFERON ALPHA-INDUCIBLE PROTEIN 27
LLU|FUN_010218-T1
LLU|FUN_010219-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_010220-T1
LLU|FUN_010221-T1
LLU|FUN_010222-T1ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER
LLU|FUN_010223-T1GH01354P
LLU|FUN_010224-T1PROTEIN CBG26694
LLU|FUN_010225-T1
LLU|FUN_010226-T1
LLU|FUN_010227-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_010228-T1
LLU|FUN_010229-T1NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT
LLU|FUN_010230-T1
LLU|FUN_010231-T1TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED
LLU|FUN_010232-T1
LLU|FUN_010233-T1DYNEIN HEAVY CHAIN FAMILY PROTEIN
LLU|FUN_010234-T1DYNEIN HEAVY CHAIN FAMILY PROTEIN
LLU|FUN_010235-T1DYNEIN HEAVY CHAIN FAMILY PROTEIN
LLU|FUN_010236-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_010237-T1DYNEIN HEAVY CHAIN FAMILY PROTEIN
LLU|FUN_010238-T1
LLU|FUN_010239-T1ASPARTYL PROTEASE-RELATED
LLU|FUN_010240-T1
LLU|FUN_010241-T1
LLU|FUN_010242-T1
LLU|FUN_010243-T1
LLU|FUN_010244-T1
LLU|FUN_010245-T1NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52
LLU|FUN_010246-T1
LLU|FUN_010247-T1
LLU|FUN_010248-T1
LLU|FUN_010249-T1
LLU|FUN_010250-T1
LLU|FUN_010251-T1FACIOGENITAL DYSPLASIA PROTEIN
LLU|FUN_010252-T1
LLU|FUN_010253-T1FATTY ACID DESATURASE 2
LLU|FUN_010254-T1
LLU|FUN_010255-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_010256-T1METAL DEPENDENT HYDROLASE - RELATED
LLU|FUN_010257-T1
LLU|FUN_010258-T1
LLU|FUN_010259-T1
LLU|FUN_010260-T1
LLU|FUN_010261-T1REPETIN
LLU|FUN_010262-T1
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