About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_010162-T1SI:CH211-67E16.11
LLU|FUN_010163-T1
LLU|FUN_010164-T1
LLU|FUN_010165-T1PROTEIN EVA-1
LLU|FUN_010166-T1
LLU|FUN_010167-T1
LLU|FUN_010168-T1
LLU|FUN_010169-T1
LLU|FUN_010170-T1
LLU|FUN_010171-T1PROTEIN EVA-1
LLU|FUN_010172-T1OPSIN
LLU|FUN_010173-T1ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
LLU|FUN_010174-T1ABC TRANSPORTER B FAMILY
LLU|FUN_010175-T1OXIDOREDUCTASE NAD-BINDING DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_010176-T1
LLU|FUN_010177-T1
LLU|FUN_010178-T1
LLU|FUN_010179-T1TUDOR DOMAIN CONTAINING PROTEIN
LLU|FUN_010180-T1TUDOR DOMAIN CONTAINING PROTEIN
LLU|FUN_010181-T1
LLU|FUN_010182-T1PROTEIN EVA-1
LLU|FUN_010183-T1
LLU|FUN_010184-T1
LLU|FUN_010185-T1
LLU|FUN_010186-T1
LLU|FUN_010187-T1
LLU|FUN_010188-T1
LLU|FUN_010189-T1
LLU|FUN_010190-T1
LLU|FUN_010191-T1PROTEASOME MATURATION PROTEIN UMP1
LLU|FUN_010193-T1CHROMOSOME 8 OPEN READING FRAME 48
LLU|FUN_010194-T1RAD50
LLU|FUN_010195-T1
LLU|FUN_010196-T1ATP-DEPENDENT RNA HELICASE
LLU|FUN_010197-T1
LLU|FUN_010198-T1
LLU|FUN_010199-T1PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED
LLU|FUN_010200-T1BETA-AMYLOID BINDING PROTEIN-RELATED
LLU|FUN_010201-T1CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN
LLU|FUN_010202-T1PROPERDIN
LLU|FUN_010203-T1PROPERDIN
LLU|FUN_010204-T1
LLU|FUN_010205-T1STANNIOCALCIN
LLU|FUN_010206-T1
LLU|FUN_010207-T1
LLU|FUN_010208-T1
LLU|FUN_010209-T1UNCHARACTERIZED
LLU|FUN_010210-T1NETRIN/LAMININ-RELATED
LLU|FUN_010211-T1
LLU|FUN_010212-T1RGD1565685 PROTEIN
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