About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_006107-T1CYCLINS
LLU|FUN_006108-T1YES-ASSOCIATED PROTEIN YAP1 FAMILY MEMBER
LLU|FUN_006109-T1YES-ASSOCIATED PROTEIN YAP1 FAMILY MEMBER
LLU|FUN_006110-T1
LLU|FUN_006111-T1
LLU|FUN_006112-T1
LLU|FUN_006113-T1
LLU|FUN_006114-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
LLU|FUN_006115-T1
LLU|FUN_006116-T1
LLU|FUN_006117-T1
LLU|FUN_006118-T1
LLU|FUN_006119-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
LLU|FUN_006120-T1MRNA-CAPPING ENZYME
LLU|FUN_006121-T1ACYL-COA THIOESTERASE
LLU|FUN_006122-T1SORTING NEXIN
LLU|FUN_006123-T1
LLU|FUN_006124-T1ANTIGEN BSP, PUTATIVE-RELATED
LLU|FUN_006125-T1
LLU|FUN_006127-T1CYSTEINE-RICH PDF MOTIF DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_006128-T1STABILIN
LLU|FUN_006129-T1
LLU|FUN_006130-T1STABILIN
LLU|FUN_006131-T1
LLU|FUN_006132-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
LLU|FUN_006133-T1
LLU|FUN_006134-T1CHROMOSOME 1 OPEN READING FRAME 112
LLU|FUN_006135-T1ZINC FINGER MYND DOMAIN-CONTAINING PROTEIN 19
LLU|FUN_006136-T16-PHOSPHOGLUCONOLACTONASE
LLU|FUN_006137-T1
LLU|FUN_006138-T1GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD
LLU|FUN_006139-T1FARNESYLCYSTEINE LYASE
LLU|FUN_006140-T1DIABLO HOMOLOG, MITOCHONDRIAL
LLU|FUN_006141-T1HYDROLASE
LLU|FUN_006142-T1UNCHARACTERIZED
LLU|FUN_006143-T1SINGLE-STRANDED DNA-BINDING PROTEIN
LLU|FUN_006144-T1COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
LLU|FUN_006145-T1TRNA METHYLTRANSFERASE
LLU|FUN_006146-T1ADP RIBOSYLATION FACTOR-RELATED
LLU|FUN_006147-T1GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
LLU|FUN_006148-T1
LLU|FUN_006149-T1NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
LLU|FUN_006150-T1
LLU|FUN_006151-T1-
LLU|FUN_006152-T1
LLU|FUN_006153-T1G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
LLU|FUN_006154-T1
LLU|FUN_006155-T1
LLU|FUN_006156-T1USP DOMAIN-CONTAINING PROTEIN
LLU|FUN_006157-T1
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