About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_005903-T1
LLU|FUN_005904-T1UNC-93 RELATED
LLU|FUN_005905-T1
LLU|FUN_005906-T1UNC-93 RELATED
LLU|FUN_005907-T1
LLU|FUN_005908-T1
LLU|FUN_005909-T1
LLU|FUN_005910-T1GPI TRANSAMIDASE COMPONENT PIG-S
LLU|FUN_005911-T1
LLU|FUN_005912-T1MOLTING PROTEIN MLT-4
LLU|FUN_005913-T1GOS-28 SNARE- RELATED
LLU|FUN_005914-T1
LLU|FUN_005915-T1
LLU|FUN_005916-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_005917-T1LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD
LLU|FUN_005918-T1TRANSFERASE, PUTATIVE-RELATED
LLU|FUN_005919-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_005920-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_005921-T1MULTIDRUG RESISTANCE PROTEIN
LLU|FUN_005922-T1
LLU|FUN_005923-T1
LLU|FUN_005924-T1ATP-DEPENDENT RNA HELICASE DBP3
LLU|FUN_005925-T12-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL
LLU|FUN_005926-T1DESUMOYLATING ISOPEPTIDASE
LLU|FUN_005927-T1PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT H
LLU|FUN_005928-T1XANTHINE DEHYDROGENASE
LLU|FUN_005929-T1
LLU|FUN_005930-T1XANTHINE DEHYDROGENASE
LLU|FUN_005931-T1XANTHINE DEHYDROGENASE
LLU|FUN_005932-T1
LLU|FUN_005933-T1
LLU|FUN_005934-T1
LLU|FUN_005935-T1AGAP005574-PA
LLU|FUN_005936-T1
LLU|FUN_005937-T1OVOCHYMASE-RELATED
LLU|FUN_005938-T1ATILLA, ISOFORM B-RELATED-RELATED
LLU|FUN_005939-T1CALCIUM-SIGNAL MODULATING CYCLOPHILIN LIGAND CAML
LLU|FUN_005940-T1SOLUTE CARRIER FAMILY 25
LLU|FUN_005941-T1FOLLICULIN FAMILY MEMBER
LLU|FUN_005942-T1PROTOHEME IX FARNESYLTRANSFERASE, MITOCHONDRIAL
LLU|FUN_005943-T1
LLU|FUN_005944-T1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
LLU|FUN_005945-T1PUTATIVE TREBLE-CLEF ZINC-FINGER C2ORF42 FAMILY MEMBER
LLU|FUN_005946-T1PUTATIVE TREBLE-CLEF ZINC-FINGER C2ORF42 FAMILY MEMBER
LLU|FUN_005947-T1
LLU|FUN_005948-T1
LLU|FUN_005949-T1
LLU|FUN_005950-T1PROTEIN DISPATCHED-RELATED
LLU|FUN_005951-T1PROTEIN DISPATCHED-RELATED
LLU|FUN_005952-T1
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