About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_005953-T1PHD-TYPE DOMAIN-CONTAINING PROTEIN
LLU|FUN_005954-T1
LLU|FUN_005955-T1
LLU|FUN_005956-T1
LLU|FUN_005957-T1CAS SCAFFOLDING PROTEIN
LLU|FUN_005958-T1
LLU|FUN_005959-T1TESTIS, PROSTATE AND PLACENTA-EXPRESSED PROTEIN
LLU|FUN_005960-T1NUCLEAR HORMONE RECEPTOR
LLU|FUN_005961-T1UNCHARACTERIZED
LLU|FUN_005962-T1DDB1- AND CUL4-ASSOCIATED FACTOR 11
LLU|FUN_005963-T1ANOCTAMIN
LLU|FUN_005964-T1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
LLU|FUN_005965-T1ZINC FINGER PROTEIN
LLU|FUN_005966-T1
LLU|FUN_005967-T1
LLU|FUN_005968-T1HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
LLU|FUN_005969-T1
LLU|FUN_005970-T1PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17
LLU|FUN_005971-T1COPINE
LLU|FUN_005972-T1GEO11419P1
LLU|FUN_005973-T1GEO11419P1
LLU|FUN_005974-T1
LLU|FUN_005975-T1GEO11419P1
LLU|FUN_005976-T1COPINE
LLU|FUN_005977-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_005978-T1
LLU|FUN_005979-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_005981-T1
LLU|FUN_005982-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_005983-T1
LLU|FUN_005984-T1
LLU|FUN_005985-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_005986-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_005987-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_005988-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_005989-T1
LLU|FUN_005990-T1
LLU|FUN_005991-T1
LLU|FUN_005992-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_005993-T1
LLU|FUN_005994-T1
LLU|FUN_005995-T1DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE
LLU|FUN_005996-T1ADP-RIBOSYLATION FACTOR-RELATED PROTEIN 1
LLU|FUN_005997-T1
LLU|FUN_005998-T1
LLU|FUN_005999-T1NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
LLU|FUN_006000-T1CYTOKINE RECEPTOR
LLU|FUN_006001-T1
LLU|FUN_006002-T1HILLARIN
LLU|FUN_006003-T1
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