About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_005852-T1
LLU|FUN_005853-T1EUKARYOTIC ELONGATION FACTOR 2 KINASE-RELATED
LLU|FUN_005855-T1TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54
LLU|FUN_005856-T1
LLU|FUN_005857-T1
LLU|FUN_005858-T1
LLU|FUN_005859-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_005860-T1
LLU|FUN_005861-T1
LLU|FUN_005862-T1
LLU|FUN_005863-T1
LLU|FUN_005864-T1NEUROPEPTIDES RECEPTOR
LLU|FUN_005865-T1
LLU|FUN_005866-T1
LLU|FUN_005867-T1MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
LLU|FUN_005868-T1
LLU|FUN_005869-T1
LLU|FUN_005870-T1
LLU|FUN_005871-T1ZINC FINGER TRANSCRIPTION FACTOR TRPS1
LLU|FUN_005872-T1
LLU|FUN_005873-T1GTP-BINDING PROTEIN 8
LLU|FUN_005874-T1CAMK FAMILY PROTEIN KINASE
LLU|FUN_005875-T1
LLU|FUN_005876-T1
LLU|FUN_005877-T1MYOSIN HEAVY CHAIN, NON-MUSCLE
LLU|FUN_005878-T1MYOSIN HEAVY CHAIN, NON-MUSCLE
LLU|FUN_005879-T1
LLU|FUN_005880-T1
LLU|FUN_005881-T1UNC80
LLU|FUN_005882-T1
LLU|FUN_005883-T1
LLU|FUN_005884-T1UNC80
LLU|FUN_005885-T1UNC80
LLU|FUN_005886-T1
LLU|FUN_005887-T1
LLU|FUN_005888-T1HOMEOTIC PROTEIN DEFORMED
LLU|FUN_005889-T1
LLU|FUN_005890-T1
LLU|FUN_005891-T1
LLU|FUN_005892-T1DPY30-RELATED
LLU|FUN_005893-T1SYMPLEKIN-RELATED
LLU|FUN_005894-T1SPORE COAT PROTEIN SP85
LLU|FUN_005895-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
LLU|FUN_005896-T1
LLU|FUN_005897-T1
LLU|FUN_005898-T1
LLU|FUN_005899-T1SYMPLEKIN-RELATED
LLU|FUN_005900-T1SYMPLEKIN-RELATED
LLU|FUN_005901-T1PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED
LLU|FUN_005902-T1UNC-93 RELATED
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