About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_005750-T1
LLU|FUN_005751-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
LLU|FUN_005752-T1
LLU|FUN_005753-T1DELTEX-RELATED
LLU|FUN_005754-T1ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE
LLU|FUN_005755-T1ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE
LLU|FUN_005756-T1ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE
LLU|FUN_005757-T1
LLU|FUN_005758-T1NUCLEAR FACTOR NF-KAPPA-B PROTEIN
LLU|FUN_005759-T1
LLU|FUN_005760-T1SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
LLU|FUN_005761-T1
LLU|FUN_005762-T1
LLU|FUN_005763-T1
LLU|FUN_005764-T1
LLU|FUN_005765-T1NUCLEOPORIN P54
LLU|FUN_005766-T1ZINC FINGER PROTEIN 330
LLU|FUN_005767-T1OLIGOPHRENIN 1
LLU|FUN_005768-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
LLU|FUN_005769-T1
LLU|FUN_005770-T1SEL-1-LIKE PROTEIN
LLU|FUN_005771-T1
LLU|FUN_005772-T1
LLU|FUN_005773-T1
LLU|FUN_005774-T1
LLU|FUN_005775-T1PROSTAGLANDIN REDUCTASE
LLU|FUN_005776-T1TNF RECEPTOR ASSOCIATED FACTOR
LLU|FUN_005777-T1
LLU|FUN_005778-T1
LLU|FUN_005779-T1PROTEIN EVA-1
LLU|FUN_005780-T1REGULATOR OF CHROMOSOME CONDENSATION
LLU|FUN_005781-T1-
LLU|FUN_005782-T1-
LLU|FUN_005783-T1REGULATOR OF CHROMOSOME CONDENSATION
LLU|FUN_005784-T1
LLU|FUN_005785-T1TRANSFERASE, PUTATIVE-RELATED
LLU|FUN_005786-T1
LLU|FUN_005787-T1
LLU|FUN_005788-T1PX DOMAIN-CONTAINING PROTEIN
LLU|FUN_005789-T1
LLU|FUN_005790-T1UNCHARACTERIZED
LLU|FUN_005791-T1
LLU|FUN_005792-T1COLLAGEN ALPHA
LLU|FUN_005793-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
LLU|FUN_005794-T1
LLU|FUN_005795-T1
LLU|FUN_005796-T1
LLU|FUN_005797-T1
LLU|FUN_005798-T1
LLU|FUN_005799-T1
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