About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_006258-T1DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
LLU|FUN_006259-T1
LLU|FUN_006260-T1
LLU|FUN_006261-T1DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
LLU|FUN_006262-T1DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
LLU|FUN_006263-T1
LLU|FUN_006264-T1
LLU|FUN_006265-T1
LLU|FUN_006266-T1
LLU|FUN_006267-T1
LLU|FUN_006268-T1
LLU|FUN_006269-T1
LLU|FUN_006270-T1
LLU|FUN_006271-T1
LLU|FUN_006272-T1UNCHARACTERIZED
LLU|FUN_006273-T1
LLU|FUN_006274-T1STRAWBERRY NOTCH-RELATED
LLU|FUN_006275-T1TRANSCRIPTION COFACTOR VESTIGIAL-LIKE PROTEIN
LLU|FUN_006276-T1EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER
LLU|FUN_006277-T1
LLU|FUN_006278-T1
LLU|FUN_006279-T1
LLU|FUN_006280-T1UNCHARACTERIZED
LLU|FUN_006281-T1COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
LLU|FUN_006282-T1COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
LLU|FUN_006283-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_006284-T1XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
LLU|FUN_006285-T1XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
LLU|FUN_006286-T1
LLU|FUN_006287-T1XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
LLU|FUN_006288-T1XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
LLU|FUN_006289-T1XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
LLU|FUN_006290-T1XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
LLU|FUN_006291-T1
LLU|FUN_006292-T1
LLU|FUN_006293-T1
LLU|FUN_006294-T1
LLU|FUN_006295-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_006296-T1
LLU|FUN_006297-T1
LLU|FUN_006298-T1
LLU|FUN_006299-T1
LLU|FUN_006300-T1
LLU|FUN_006301-T1ADAPTOR PROTEIN, PHOSPHOTYROSINE INTERACTION, PH DOMAIN AND LEUCINE ZIPPER-CONTAINING 2
LLU|FUN_006302-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_006303-T1
LLU|FUN_006304-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_006305-T1EIF-1A
LLU|FUN_006306-T1SULFOTRANSFERASE SULT
LLU|FUN_006307-T1SULFOTRANSFERASE SULT
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