About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_006208-T1
LLU|FUN_006209-T1
LLU|FUN_006210-T1
LLU|FUN_006211-T1PARATHYROID HORMONE-RESPONSIVE B1 GENE
LLU|FUN_006212-T1ENDOPLASMIC RETICULUM RESIDENT PROTEIN 44
LLU|FUN_006213-T1
LLU|FUN_006214-T1
LLU|FUN_006215-T1
LLU|FUN_006216-T1GH10160P
LLU|FUN_006217-T1TRANSPOSON TY3-I GAG-POL POLYPROTEIN
LLU|FUN_006218-T1
LLU|FUN_006219-T1
LLU|FUN_006220-T1GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
LLU|FUN_006221-T1GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
LLU|FUN_006222-T1MRNA-CAPPING ENZYME
LLU|FUN_006223-T1DNA2/NAM7 HELICASE FAMILY
LLU|FUN_006224-T1
LLU|FUN_006225-T1DNA2/NAM7 HELICASE FAMILY
LLU|FUN_006226-T1
LLU|FUN_006227-T1
LLU|FUN_006228-T1NUCLEOPORIN AMO1-LIKE
LLU|FUN_006229-T1
LLU|FUN_006230-T1
LLU|FUN_006231-T1DNA2/NAM7 HELICASE FAMILY
LLU|FUN_006232-T1NUCLEOPORIN AMO1-LIKE
LLU|FUN_006233-T1MRNA-CAPPING ENZYME
LLU|FUN_006234-T1INHIBITOR OF APOPTOSIS
LLU|FUN_006235-T1
LLU|FUN_006236-T1
LLU|FUN_006237-T1INHIBITOR OF APOPTOSIS
LLU|FUN_006238-T1
LLU|FUN_006239-T1INHIBITOR OF APOPTOSIS
LLU|FUN_006240-T1BETA-HEXOSAMINIDASE
LLU|FUN_006241-T1BETA-HEXOSAMINIDASE
LLU|FUN_006242-T1GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN PFC0235W
LLU|FUN_006243-T1
LLU|FUN_006244-T1
LLU|FUN_006245-T1
LLU|FUN_006246-T1
LLU|FUN_006247-T1PHD-TYPE DOMAIN-CONTAINING PROTEIN
LLU|FUN_006248-T1
LLU|FUN_006249-T1
LLU|FUN_006250-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_006251-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_006252-T1
LLU|FUN_006253-T1CRUMBS FAMILY MEMBER
LLU|FUN_006254-T1
LLU|FUN_006255-T1
LLU|FUN_006256-T1
LLU|FUN_006257-T1DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
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