About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51188
Paelopatides51189FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides51190FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides51191ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides51192
Paelopatides51193UNCHARACTERIZED
Paelopatides51194
Paelopatides51195
Paelopatides51196L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides51197CYTOKINE RECEPTOR
Paelopatides51198CYTOKINE RECEPTOR
Paelopatides51199
Paelopatides51200ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides51201-
Paelopatides5120260S RIBOSOMAL PROTEIN L3-RELATED
Paelopatides51203NADH-UBIQUINONE OXIDOREDUCTASE PDSW SUBUNIT
Paelopatides51204LP04239P
Paelopatides51205TEKTIN
Paelopatides51206RNA AND EXPORT FACTOR BINDING PROTEIN
Paelopatides51207RHO GDP-DISSOCIATION INHIBITOR
Paelopatides51208PR DOMAIN ZINC FINGER PROTEIN
Paelopatides51209-
Paelopatides51210N-LYSINE METHYLTRANSFERASE KMT5A
Paelopatides51211SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides51212SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides51213ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Paelopatides51215MALONYL-COA ACP TRANSACYLASE, ACP-BINDING
Paelopatides51216PROTEIN CBG10425
Paelopatides51217
Paelopatides51218ZINC FINGER PROTEIN
Paelopatides51219RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Paelopatides51220RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Paelopatides51221MALONYL-COA ACP TRANSACYLASE, ACP-BINDING
Paelopatides51222EXPRESSED PROTEIN
Paelopatides51223
Paelopatides51224
Paelopatides51225
Paelopatides51226REGULATOR OF CHROMOSOME CONDENSATION
Paelopatides51228ALSIN HOMOLOG
Paelopatides51229VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25
Paelopatides51230REVERSE TRANSCRIPTASES
Paelopatides51231REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51232DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5
Paelopatides51233NITRATE, FORMATE, IRON DEHYDROGENASE
Paelopatides51234CYTOCHROME P450 508A4-RELATED
Paelopatides51235ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides51236
Paelopatides51237SI:CH211-196P9.1-RELATED
Paelopatides51238NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides51239ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
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