The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides51087 | GLYCOPROTEIN HORMONE RECEPTOR |
Paelopatides51088 | |
Paelopatides51089 | |
Paelopatides51090 | |
Paelopatides51091 | |
Paelopatides51092 | SPECTRIN REPEAT CONTAINING NUCLEAR ENVELOPE PROTEIN 2 |
Paelopatides51093 | SPECTRIN REPEAT CONTAINING NUCLEAR ENVELOPE PROTEIN 2 |
Paelopatides51094 | PROTEIN CBG26694 |
Paelopatides51095 | PKA ANCHORING PROTEIN |
Paelopatides51096 | UDP/ADP-SUGAR PYROPHOSPHATASE |
Paelopatides51097 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides51098 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
Paelopatides51099 | |
Paelopatides51100 | |
Paelopatides51101 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
Paelopatides51102 | BUCENTAUR RELATED |
Paelopatides51103 | PROTEIN CBG26694 |
Paelopatides51104 | |
Paelopatides51105 | PROTEIN CBG26694 |
Paelopatides51106 | |
Paelopatides51107 | |
Paelopatides51108 | DIHYDRODIPICOLINATE SYNTHASE |
Paelopatides51109 | BADF TYPE ATPASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51110 | TRANSMEMBRANE PROTEIN 127 |
Paelopatides51111 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 9 |
Paelopatides51112 | PHOSPHOLIPID SCRAMBLASE-RELATED |
Paelopatides51113 | |
Paelopatides51114 | |
Paelopatides51115 | LYSINE-SPECIFIC DEMETHYLASE |
Paelopatides51116 | |
Paelopatides51117 | |
Paelopatides51118 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides51119 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides51120 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides51121 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51122 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides51123 | |
Paelopatides51124 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides51125 | SYNAPTIC VESICLE GLYCOPROTEIN 2 |
Paelopatides51126 | |
Paelopatides51127 | POL PROTEIN |
Paelopatides51128 | REVERSE TRANSCRIPTASES |
Paelopatides51129 | |
Paelopatides51130 | PEPTIDASE S8 |
Paelopatides51131 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
Paelopatides51132 | |
Paelopatides51133 | NFATC2-INTERACTING PROTEIN |
Paelopatides51134 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51135 | PHOSPHATIDYLINOSITOL SYNTHASE |
Paelopatides51136 | - |