About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51240DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides51241
Paelopatides51242DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Paelopatides51243PROTEIN CBG26694
Paelopatides51244
Paelopatides51245FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides51246
Paelopatides51247
Paelopatides51248REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51249REVERSE TRANSCRIPTASES
Paelopatides51250
Paelopatides51251
Paelopatides51252
Paelopatides51253
Paelopatides51254FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides51255FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides51256ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides51257NUCLEAR PORE COMPLEX PROTEIN NUP155
Paelopatides51258
Paelopatides51259
Paelopatides51260REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51261TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides51262PEPTIDASE
Paelopatides51263CD59 GLYCOPROTEIN
Paelopatides51264REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51265UNCHARACTERIZED
Paelopatides51266UNCHARACTERIZED
Paelopatides51267CENTROSOMAL PROTEIN KIZUNA
Paelopatides51268
Paelopatides51269MYOSIN HEAVY CHAIN - RELATED
Paelopatides51270TRANSMEMBRANE PROTEIN 179
Paelopatides51271REVERSE TRANSCRIPTASES
Paelopatides51272PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
Paelopatides51273PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
Paelopatides51274PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
Paelopatides51275
Paelopatides51276WD REPEAT PROTEIN 26-RELATED
Paelopatides51278LETHAL 2 DENTICLELESS PROTEIN RETINOIC ACID-REGULATED NUCLEAR MATRIX-ASSOCIATED PROTEIN
Paelopatides51279
Paelopatides51280C1ORF73 PROTEIN
Paelopatides51281REGULATOR COMPLEX PROTEIN LAMTOR3
Paelopatides51282METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN
Paelopatides51283METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN
Paelopatides51284LYSOPHOSPHOLIPASE-RELATED
Paelopatides51285
Paelopatides51286PROTEIN CBG26694
Paelopatides51287IMIDAZOLONEPROPIONASE
Paelopatides51288IMIDAZOLONEPROPIONASE
Paelopatides51289ENZYMATIC POLYPROTEIN-RELATED
Paelopatides51290TRANSPOSON TY3-I GAG-POL POLYPROTEIN
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