The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides50987 | SH3 DOMAIN-CONTAINING |
Paelopatides50988 | |
Paelopatides50989 | UBIQUITIN-LIKE PROTEIN 5 |
Paelopatides50990 | ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 |
Paelopatides50991 | ATP-BINDING CASSETTE SUB-FAMILY C |
Paelopatides50992 | PROTEIN CBG26694 |
Paelopatides50993 | |
Paelopatides50994 | IMPORTIN BETA |
Paelopatides50995 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Paelopatides50996 | |
Paelopatides50997 | |
Paelopatides50998 | AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE |
Paelopatides50999 | AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE |
Paelopatides51000 | MUCIN-17 |
Paelopatides51001 | ZINC FINGER PROTEIN DZIP1 |
Paelopatides51002 | - |
Paelopatides51003 | APOPTOSIS-INDUCING FACTOR 1 |
Paelopatides51004 | APOPTOSIS-INDUCING FACTOR 1 |
Paelopatides51005 | MOTILE SPERM DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides51006 | RAS-RELATED PROTEIN RAB |
Paelopatides51007 | ATP-DEPENDENT RNA HELICASE DBP3 |
Paelopatides51008 | |
Paelopatides51009 | SERINE/THREONINE-PROTEIN KINASE TAO |
Paelopatides51010 | PROTEIN CBG26694 |
Paelopatides51011 | |
Paelopatides51012 | GOLGIN |
Paelopatides51013 | GOLGIN |
Paelopatides51014 | GOLGIN |
Paelopatides51015 | U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN |
Paelopatides51016 | |
Paelopatides51017 | RIBONUCLEASE P SUBUNIT P25 |
Paelopatides51018 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides51019 | |
Paelopatides51020 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides51021 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides51022 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides51023 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51024 | |
Paelopatides51025 | INTEGRIN BETA SUBUNIT |
Paelopatides51026 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides51027 | PROTEIN CBG26694 |
Paelopatides51028 | O-METHYLTRANSFERASE-RELATED |
Paelopatides51029 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides51030 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides51031 | PROTEIN CBG10425 |
Paelopatides51032 | |
Paelopatides51033 | LEPTIN RECEPTOR-RELATED |
Paelopatides51034 | BUCENTAUR RELATED |
Paelopatides51035 | METALLOENDOPEPTIDASE OMA1 |
Paelopatides51036 | TYROSINE-PROTEIN KINASE RECEPTOR |