About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50879FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides5088060S RIBOSOMAL PROTEIN L4
Paelopatides50881SI:CH211-108C17.2-RELATED-RELATED
Paelopatides50882PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides50883RETROTRANSPOSON
Paelopatides50884RETROTRANSPOSON
Paelopatides50885PROTEIN CBG26694
Paelopatides50886PROTEIN CBG26694
Paelopatides50887POL PROTEIN
Paelopatides50888
Paelopatides50889REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides50890B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides50891ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides50892POL PROTEIN
Paelopatides50893ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides50894ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides50895ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides50896POL PROTEIN
Paelopatides50897ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides50898EXPRESSED PROTEIN
Paelopatides50899TUBULIN
Paelopatides50900TUBULIN
Paelopatides50901PROTEIN CBG26694
Paelopatides50902ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides50903REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides50905ENDONUCLEASE-RELATED
Paelopatides50906POL PROTEIN
Paelopatides50907
Paelopatides50908RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides50909TRANSPOSASE, PUTATIVE-RELATED
Paelopatides50910
Paelopatides50911
Paelopatides50912OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides50913URIDINE DIPHOSPHATE GLUCOSE PYROPHOSPHATASE
Paelopatides50914
Paelopatides50915AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides5091626S PROTEASOME NON-ATPASE REGULATORY SUBUNIT
Paelopatides50917SUGAR KINASE
Paelopatides50918INTRACELLULAR TRAFFIC PROTEIN-RELATED
Paelopatides50919
Paelopatides50920CARBOHYDRATE SULFOTRANSFERASE 15
Paelopatides50921CARBOHYDRATE SULFOTRANSFERASE 15
Paelopatides50922GLYCOGENIN SUBFAMILY MEMBER
Paelopatides50923FOLATE TRANSPORTER
Paelopatides50924FOLATE TRANSPORTER
Paelopatides50925FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides50926
Paelopatides50927ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides50929BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER
Paelopatides50930POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
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