The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides50829 | TNF RECEPTOR ASSOCIATED FACTOR |
Paelopatides50830 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50831 | BUCENTAUR RELATED |
Paelopatides50832 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Paelopatides50833 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides50834 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides50835 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides50836 | |
Paelopatides50837 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Paelopatides50838 | NGD5/OSM-6/IFT52 |
Paelopatides50839 | UNCHARACTERIZED |
Paelopatides50840 | |
Paelopatides50841 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50842 | GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT |
Paelopatides50843 | CYTOKINE RECEPTOR |
Paelopatides50844 | |
Paelopatides50845 | |
Paelopatides50846 | |
Paelopatides50847 | ENDONUCLEASE-RELATED |
Paelopatides50848 | CENTROSOME SPINDLE POLE ASSOCIATED PROTEIN |
Paelopatides50849 | |
Paelopatides50850 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides50851 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides50852 | |
Paelopatides50853 | ZYX102 PROTEIN |
Paelopatides50854 | WD40 REPEAT PROTEIN |
Paelopatides50855 | S -2-HYDROXY-ACID OXIDASE-RELATED |
Paelopatides50856 | - |
Paelopatides50857 | |
Paelopatides50858 | |
Paelopatides50859 | G PROTEIN-COUPLED RECEPTOR-RELATED |
Paelopatides50860 | CENTROMERE PROTEIN C |
Paelopatides50861 | |
Paelopatides50862 | |
Paelopatides50863 | |
Paelopatides50864 | REVERSE TRANSCRIPTASES |
Paelopatides50865 | BUCENTAUR RELATED |
Paelopatides50866 | |
Paelopatides50867 | |
Paelopatides50868 | PINSTRIPE, ISOFORM A |
Paelopatides50869 | |
Paelopatides50870 | ENDONUCLEASE |
Paelopatides50871 | |
Paelopatides50872 | PROTEIN CBG26694 |
Paelopatides50873 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
Paelopatides50874 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50875 | PROTEIN CBG26694 |
Paelopatides50876 | SESQUIPEDALIAN |
Paelopatides50877 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
Paelopatides50878 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |