The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides50667 | |
Paelopatides50668 | HELICASE WITH DEATH DOMAIN-RELATED |
Paelopatides50669 | HELICASE WITH DEATH DOMAIN-RELATED |
Paelopatides50670 | |
Paelopatides50671 | |
Paelopatides50672 | ZGC:101858 |
Paelopatides50673 | PROTEIN CBG26694 |
Paelopatides50674 | PROTEIN CBG26694 |
Paelopatides50675 | |
Paelopatides50676 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides50677 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides50678 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50679 | PROTEIN CBG26694 |
Paelopatides50680 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Paelopatides50681 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Paelopatides50682 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Paelopatides50683 | NG5 |
Paelopatides50684 | |
Paelopatides50685 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides50686 | DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED |
Paelopatides50687 | PYRROLINE-5-CARBOXYLATE REDUCTASE |
Paelopatides50688 | |
Paelopatides50689 | INTEGRAL MEMBRANE PROTEIN GPR177 |
Paelopatides50690 | INTEGRAL MEMBRANE PROTEIN GPR177 |
Paelopatides50692 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50693 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50695 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50696 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50697 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides50698 | |
Paelopatides50699 | |
Paelopatides50700 | |
Paelopatides50701 | BUCENTAUR RELATED |
Paelopatides50702 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50703 | |
Paelopatides50704 | |
Paelopatides50705 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50706 | |
Paelopatides50707 | |
Paelopatides50708 | |
Paelopatides50709 | POL PROTEIN |
Paelopatides50710 | BONUS, ISOFORM C-RELATED |
Paelopatides50711 | OS05G0300700 PROTEIN |
Paelopatides50712 | NITRILASE-RELATED |
Paelopatides50713 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 77 |
Paelopatides50714 | THAP DOMAIN PROTEIN |
Paelopatides50715 | ATP-DEPENDENT DNA HELICASE |
Paelopatides50716 | PATCHED-RELATED |
Paelopatides50717 | - |
Paelopatides50718 | SLL0310 PROTEIN |