The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides50354 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50355 | |
Paelopatides50356 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides50357 | |
Paelopatides50358 | PEPTIDE N-GLYCANASE PNGASE -RELATED |
Paelopatides50359 | |
Paelopatides50360 | CELL DEATH ACTIVATOR CIDE |
Paelopatides50361 | IP13529P |
Paelopatides50362 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides50363 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides50364 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides50365 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides50366 | |
Paelopatides50367 | ENOYL-COA HYDRATASE-RELATED |
Paelopatides50368 | ENOYL-COA HYDRATASE-RELATED |
Paelopatides50369 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides50370 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides50371 | PROTEIN CBG23806 |
Paelopatides50372 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides50373 | GLUTAMINE SYNTHETASE |
Paelopatides50376 | EXPRESSED PROTEIN |
Paelopatides50377 | |
Paelopatides50378 | NUCLEAR PROTEIN SKIP-RELATED |
Paelopatides50379 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50380 | BUCENTAUR RELATED |
Paelopatides50381 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides50382 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
Paelopatides50383 | TYROSINE-PROTEIN KINASE RECEPTOR |
Paelopatides50384 | STERILE20-LIKE KINASE, ISOFORM B-RELATED |
Paelopatides50385 | |
Paelopatides50386 | |
Paelopatides50387 | |
Paelopatides50388 | GLYCOGEN SYNTHASE |
Paelopatides50389 | GLYCOGEN SYNTHASE |
Paelopatides50390 | GLYCOGEN SYNTHASE |
Paelopatides50391 | |
Paelopatides50392 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
Paelopatides50393 | RAGULATOR COMPLEX PROTEIN LAMTOR4 |
Paelopatides50394 | MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED |
Paelopatides50401 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
Paelopatides50402 | MONOCARBOXYLATE TRANSPORTER |
Paelopatides50403 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides50404 | |
Paelopatides50405 | - |
Paelopatides50406 | RIBOSOMAL PROTEIN S7 |
Paelopatides50407 | |
Paelopatides50408 | EG:114D9.1 PROTEIN-RELATED |
Paelopatides50409 | |
Paelopatides50410 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
Paelopatides50411 | ENDONUCLEASE-RELATED |