About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50304ER LUMEN PROTEIN RETAINING RECEPTOR
Paelopatides50305TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides50306UBIQUITIN-CONJUGATING ENZYME E2
Paelopatides50307
Paelopatides50308CALCIUM-INDEPENDENT PHOSPHOLIPASE A2
Paelopatides50309GAG-RELATED PROTEIN
Paelopatides50310GLYCINE DEHYDROGENASE, DECARBOXYLATING
Paelopatides50311GLYCINE DEHYDROGENASE, DECARBOXYLATING
Paelopatides50312
Paelopatides50313
Paelopatides50314AGAP005574-PA
Paelopatides50315
Paelopatides50316FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides50317FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides50318ZGC:195170
Paelopatides50319SI:CH211-108C17.2-RELATED-RELATED
Paelopatides50320ARMADILLO-TYPE FOLD-RELATED
Paelopatides50321IP13529P
Paelopatides50322TESTIS-EXPRESSED PROTEIN 26 ISOFORM X3
Paelopatides50323DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides50324FIBROUS SHEATH INTERACTING PROTEIN 1
Paelopatides50325ALPHA- 1,3 -FUCOSYLTRANSFERASE
Paelopatides50326EPM2A-INTERACTING PROTEIN 1
Paelopatides50327
Paelopatides50328
Paelopatides50329CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides50330LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides50331REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides50332
Paelopatides50333POL PROTEIN
Paelopatides50334PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides50335
Paelopatides50336
Paelopatides50337RETROTRANSPOSON
Paelopatides50338PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides50339SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides50340REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides50341BUCENTAUR RELATED
Paelopatides50342
Paelopatides50343
Paelopatides50344TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides50345ENDONUCLEASE-RELATED
Paelopatides50346CADHERIN-87A
Paelopatides50347
Paelopatides50348FAT ATYPICAL CADHERIN-RELATED
Paelopatides50349REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides50350
Paelopatides50351
Paelopatides50352
Paelopatides50353ENDONUCLEASE-RELATED
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