The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides50089 | MONOCARBOXYLATE TRANSPORTER |
Paelopatides50090 | DNA HELICASE RECQ FAMILY MEMBER |
Paelopatides50091 | MONOCARBOXYLATE TRANSPORTER |
Paelopatides50092 | ZGC:195170 |
Paelopatides50093 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides50094 | |
Paelopatides50100 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50101 | SOLUTE CARRIER FAMILY 22 MEMBER |
Paelopatides50102 | |
Paelopatides50103 | SORTING NEXIN |
Paelopatides50104 | SORTING NEXIN |
Paelopatides50105 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides50106 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides50107 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides50108 | DNA-DIRECTED RNA POLYMERASE |
Paelopatides50109 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
Paelopatides50110 | |
Paelopatides50111 | DNAJ HOMOLOG SUBFAMILY B MEMBER 9 |
Paelopatides50112 | CEREBLON |
Paelopatides50113 | PHOSPHOLIPASE-RELATED |
Paelopatides50114 | MAINTENANCE OF TELOMOERE CAPPING |
Paelopatides50115 | |
Paelopatides50116 | PROTEIN CBG26694 |
Paelopatides50117 | |
Paelopatides50118 | COILED-COIL DOMAIN-CONTAINING PROTEIN 115 |
Paelopatides50119 | BCR-ASSOCIATED PROTEIN, BAP |
Paelopatides50120 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50121 | UNCHARACTERIZED |
Paelopatides50123 | POL PROTEIN |
Paelopatides50124 | PROTEIN CBG26694 |
Paelopatides50125 | GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN |
Paelopatides50126 | |
Paelopatides50127 | NETRIN RECEPTOR UNC5 |
Paelopatides50128 | |
Paelopatides50129 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides50130 | - |
Paelopatides50131 | |
Paelopatides50132 | ENDONUCLEASE |
Paelopatides50133 | NETRIN RECEPTOR UNC5 |
Paelopatides50134 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50135 | BUCENTAUR RELATED |
Paelopatides50136 | |
Paelopatides50137 | |
Paelopatides50138 | ZINC FINGER AND BTB DOMAIN-CONTAINING |
Paelopatides50139 | |
Paelopatides50140 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides50141 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides50142 | CYTOKINE RECEPTOR |
Paelopatides50143 | DNA HELICASE RECQ FAMILY MEMBER |
Paelopatides50146 | BETA-1,4-GALACTOSYLTRANSFERASE |