The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides49938 | |
Paelopatides49939 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides49940 | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3 |
Paelopatides49941 | MORTALITY FACTOR 4-LIKE PROTEIN |
Paelopatides49942 | SUCCINYL-COA--D-CITRAMALATE COA-TRANSFERASE |
Paelopatides49943 | PROTEIN CBG26694 |
Paelopatides49944 | PIG-M MANNOSYLTRANSFERASE |
Paelopatides49945 | PIG-M MANNOSYLTRANSFERASE |
Paelopatides49946 | PHOSPHATIDYLINOSITOL GLYCAN, CLASS N |
Paelopatides49947 | PHOSPHATIDYLINOSITOL GLYCAN, CLASS N |
Paelopatides49948 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides49949 | RETROTRANSPOSON |
Paelopatides49950 | RETROTRANSPOSON |
Paelopatides49951 | LYR MOTIF-CONTAINING PROTEIN 1 |
Paelopatides49952 | |
Paelopatides49953 | |
Paelopatides49954 | |
Paelopatides49955 | PROTEIN PHOSPHATASE 2C |
Paelopatides49956 | RP42 RELATED |
Paelopatides49957 | |
Paelopatides49958 | |
Paelopatides49959 | GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA |
Paelopatides49960 | CATION-TRANSPORTING ATPASE-RELATED |
Paelopatides49961 | DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN |
Paelopatides49962 | CYCLIN |
Paelopatides49963 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Paelopatides49964 | 39S RIBOSOMAL PROTEIN L20 |
Paelopatides49965 | |
Paelopatides49966 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Paelopatides49967 | |
Paelopatides49968 | |
Paelopatides49969 | |
Paelopatides49970 | OXIDOREDUCTASE-RELATED |
Paelopatides49971 | OPSIN |
Paelopatides49972 | BONUS, ISOFORM C-RELATED |
Paelopatides49973 | BONUS, ISOFORM C-RELATED |
Paelopatides49974 | |
Paelopatides49975 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides49976 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
Paelopatides49977 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides49978 | RING FINGER PROTEIN 127 |
Paelopatides49979 | MYELIN PROTEOLIPID |
Paelopatides49980 | RING BOX |
Paelopatides49981 | ENGULFMENT AND CELL MOTILITY |
Paelopatides49982 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides49983 | |
Paelopatides49985 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides49986 | |
Paelopatides49987 | TYROSINE-PROTEIN KINASE |
Paelopatides49988 |