About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49674POL PROTEIN
Paelopatides49675CYCLIN-D-BINDING MYB-LIKE TRANSCRIPTION FACTOR 1
Paelopatides49676
Paelopatides49677SUCCINYL-COA SYNTHETASE BETA CHAIN
Paelopatides49678
Paelopatides49679ARM_2 DOMAIN-CONTAINING PROTEIN
Paelopatides49680STAR-RELATED LIPID TRANSFER PROTEIN 9
Paelopatides49681SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides49682HEMOGLOBINASE FAMILY MEMBER
Paelopatides49683HEMOGLOBINASE FAMILY MEMBER
Paelopatides49684
Paelopatides49685SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
Paelopatides49686AP COMPLEX SUBUNIT MU
Paelopatides49687RETROTRANSPOSON
Paelopatides49688PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides49689RETROTRANSPOSON
Paelopatides49690PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides49691PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides49692
Paelopatides49693
Paelopatides49694REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49695FAS-BINDING FACTOR 1
Paelopatides49696CYTOCHROME P450 FAMILY 3
Paelopatides49697HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1
Paelopatides49698DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides49699
Paelopatides49700G-PROTEIN COUPLED RECEPTOR
Paelopatides49701PROSTAGLANDIN REDUCTASE
Paelopatides49702CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49703REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49704MATRIX METALLOPROTEINASE
Paelopatides49705
Paelopatides49706FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides49707
Paelopatides49708PROTEIN CBG26694
Paelopatides49709ALPHA- 1,3 -FUCOSYLTRANSFERASE
Paelopatides49710FARNESYL-PYROPHOSPHATE SYNTHETASE
Paelopatides49711CHROMOSOME 20 ORF85 FAMILY MEMBER
Paelopatides49712GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT
Paelopatides49713REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49714GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT
Paelopatides49715NEUGRIN
Paelopatides49716M7GPPPN-MRNA HYDROLASE
Paelopatides49717TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides49718OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides49719UNCHARACTERIZED
Paelopatides49720ZINC/IRON TRANSPORTER
Paelopatides49721RABCONNECTIN-RELATED
Paelopatides49722RABCONNECTIN-RELATED
Paelopatides49723PROTEIN FAM227B
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