The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides49453 | |
| Paelopatides49454 | BETA1,3-GALACTOSYLTRANSFERASE |
| Paelopatides49455 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides49456 | ZGC:195170 |
| Paelopatides49457 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides49458 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides49459 | |
| Paelopatides49460 | |
| Paelopatides49461 | |
| Paelopatides49462 | WD REPEAT CONTAINING PROTEIN 3 WDR3 |
| Paelopatides49463 | G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER |
| Paelopatides49464 | PLACENTAL PROTEIN 11-RELATED |
| Paelopatides49465 | |
| Paelopatides49466 | |
| Paelopatides49467 | |
| Paelopatides49468 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides49469 | CYTOCHROME P450 FAMILY 46 SUBFAMILY A |
| Paelopatides49470 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49471 | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED |
| Paelopatides49472 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| Paelopatides49473 | |
| Paelopatides49474 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides49475 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides49476 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides49478 | |
| Paelopatides49479 | |
| Paelopatides49481 | ALPHA-TECTORIN-RELATED |
| Paelopatides49482 | SI:CH211-196P9.1-RELATED |
| Paelopatides49483 | ENDONUCLEASE-RELATED |
| Paelopatides49484 | POL PROTEIN |
| Paelopatides49485 | PARANEOPLASTIC ANTIGEN |
| Paelopatides49486 | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER |
| Paelopatides49487 | |
| Paelopatides49488 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| Paelopatides49489 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides49490 | BUCENTAUR RELATED |
| Paelopatides49491 | NEUROBLAST DIFFERENTIATION-ASSOCIATED PROTEIN AHNAK-LIKE PROTEIN |
| Paelopatides49492 | AGAP011572-PA |
| Paelopatides49493 | |
| Paelopatides49494 | TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4 |
| Paelopatides49495 | CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN B |
| Paelopatides49496 | |
| Paelopatides49497 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides49498 | SERINE/THREONINE-PROTEIN KINASE FRAY2 |
| Paelopatides49499 | STERILE20-LIKE KINASE, ISOFORM B-RELATED |
| Paelopatides49500 | INTEGRIN ALPHA |
| Paelopatides49501 | INTEGRIN ALPHA |
| Paelopatides49502 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides49503 | |
| Paelopatides49504 |
