The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides49138 | AFADIN- AND ALPHA-ACTININ-BINDING PROTEIN |
Paelopatides49139 | AFADIN- AND ALPHA-ACTININ-BINDING PROTEIN |
Paelopatides49140 | |
Paelopatides49141 | |
Paelopatides49142 | GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED |
Paelopatides49143 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides49144 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides49145 | CENTROMERE PROTEIN E |
Paelopatides49146 | MTG8 ETO EIGHT TWENTY ONE PROTEIN |
Paelopatides49147 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
Paelopatides49148 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides49149 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides49150 | SORTING NEXIN-29-RELATED |
Paelopatides49151 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides49152 | CXXC-TYPE ZINC FINGER PROTEIN 1 |
Paelopatides49153 | |
Paelopatides49154 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides49155 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides49156 | |
Paelopatides49157 | |
Paelopatides49158 | SI:CH211-196P9.1-RELATED |
Paelopatides49159 | UBX DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides49160 | |
Paelopatides49161 | BLOC-1 COMPLEX SUBUNIT 1 |
Paelopatides49162 | PYM PROTEIN |
Paelopatides49163 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides49164 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides49165 | PROTEIN CBG26694 |
Paelopatides49166 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides49167 | INTEGRIN ALPHA |
Paelopatides49168 | NETRIN/LAMININ-RELATED |
Paelopatides49169 | NETRIN/LAMININ-RELATED |
Paelopatides49170 | |
Paelopatides49171 | FER-1-LIKE |
Paelopatides49172 | SIDEROFLEXIN |
Paelopatides49173 | SIDEROFLEXIN |
Paelopatides49174 | SODIUM/NUCLEOSIDE COTRANSPORTER |
Paelopatides49175 | SODIUM/NUCLEOSIDE COTRANSPORTER |
Paelopatides49176 | PROTEIN CBG26694 |
Paelopatides49177 | PINSTRIPE, ISOFORM A |
Paelopatides49178 | PINSTRIPE, ISOFORM A |
Paelopatides49179 | PINSTRIPE, ISOFORM A |
Paelopatides49180 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Paelopatides49181 | DIMETHYLANILINE MONOOXYGENASE |
Paelopatides49182 | SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS |
Paelopatides49183 | SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS |
Paelopatides49184 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
Paelopatides49185 | CATION-TRANSPORTING ATPASE-RELATED |
Paelopatides49186 | REVERSE TRANSCRIPTASES |
Paelopatides49187 | UNCHARACTERIZED |