The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides48831 | |
| Paelopatides48832 | |
| Paelopatides48833 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides48834 | |
| Paelopatides48835 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48836 | RETROTRANSPOSON |
| Paelopatides48837 | RETROTRANSPOSON |
| Paelopatides48839 | RETROTRANSPOSON |
| Paelopatides48840 | RETROTRANSPOSON |
| Paelopatides48841 | |
| Paelopatides48845 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides48846 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48847 | BONUS, ISOFORM C-RELATED |
| Paelopatides48848 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides48849 | |
| Paelopatides48850 | |
| Paelopatides48851 | |
| Paelopatides48852 | PLASMINOGEN RECEPTOR (KT) |
| Paelopatides48853 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides48854 | |
| Paelopatides48855 | |
| Paelopatides48856 | |
| Paelopatides48857 | ZINC FINGER PROTEIN |
| Paelopatides48858 | ZINC FINGER PROTEIN |
| Paelopatides48859 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
| Paelopatides48860 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
| Paelopatides48861 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48863 | UNCHARACTERIZED |
| Paelopatides48864 | UNCHARACTERIZED |
| Paelopatides48865 | |
| Paelopatides48866 | PRE-MRNA SPLICING FACTOR PRP8 |
| Paelopatides48868 | BUCENTAUR RELATED |
| Paelopatides48869 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48870 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides48871 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides48872 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides48873 | |
| Paelopatides48874 | C5ORF31 |
| Paelopatides48875 | REVERSE TRANSCRIPTASES |
| Paelopatides48876 | BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN |
| Paelopatides48877 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| Paelopatides48878 | WD40 REPEAT PROTEIN |
| Paelopatides48879 | |
| Paelopatides48880 | PRE-MRNA CLEAVAGE COMPLEX II |
| Paelopatides48881 | |
| Paelopatides48882 | |
| Paelopatides48883 | PROTEIN KINASE C, MU |
| Paelopatides48884 | COILED-COIL DOMAIN-CONTAINING PROTEIN 32 |
| Paelopatides48885 | PROTEIN STPG4 |
| Paelopatides48886 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
