The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides48603 | RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE |
| Paelopatides48604 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48605 | NETRIN RECEPTOR UNC5 |
| Paelopatides48606 | |
| Paelopatides48607 | PROTEIN CBG26694 |
| Paelopatides48608 | FI04643P-RELATED |
| Paelopatides48609 | FI04643P-RELATED |
| Paelopatides48610 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides48611 | SUSHI DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides48621 | |
| Paelopatides48622 | |
| Paelopatides48623 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
| Paelopatides48624 | ENDONUCLEASE-RELATED |
| Paelopatides48625 | T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN |
| Paelopatides48626 | |
| Paelopatides48627 | NETRIN RECEPTOR UNC5 |
| Paelopatides48628 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48629 | REVERSE TRANSCRIPTASES |
| Paelopatides48630 | AAA DOMAIN-CONTAINING |
| Paelopatides48631 | |
| Paelopatides48632 | TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 |
| Paelopatides48633 | SPONDIN |
| Paelopatides48634 | SPONDIN |
| Paelopatides48635 | SPONDIN |
| Paelopatides48636 | PROTEIN CBG26694 |
| Paelopatides48637 | MYELOID LEUKEMIA FACTOR |
| Paelopatides48638 | |
| Paelopatides48639 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides48640 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48641 | FIBRILLIN-RELATED |
| Paelopatides48642 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides48643 | |
| Paelopatides48644 | PROTEIN CBG26694 |
| Paelopatides48645 | |
| Paelopatides48646 | |
| Paelopatides48647 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| Paelopatides48648 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides48649 | |
| Paelopatides48650 | |
| Paelopatides48651 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| Paelopatides48652 | PROTEIN CBG24663 |
| Paelopatides48653 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides48654 | REVERSE TRANSCRIPTASES |
| Paelopatides48655 | |
| Paelopatides48656 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| Paelopatides48657 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48658 | |
| Paelopatides48659 | NETRIN/LAMININ-RELATED |
| Paelopatides48660 | PROTEIN NJMU-R1 |
| Paelopatides48661 | PROTEIN NJMU-R1 |
