The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides48662 | DYNEIN INTERMEDIATE CHAIN |
Paelopatides48663 | AP-5 COMPLEX SUBUNIT ZETA-1 |
Paelopatides48664 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Paelopatides48665 | AP-5 COMPLEX SUBUNIT ZETA-1 |
Paelopatides48666 | METEORIN-LIKE PROTEIN |
Paelopatides48667 | |
Paelopatides48668 | METEORIN-LIKE PROTEIN |
Paelopatides48669 | PROLYL HYDROXYLASE-RELATED |
Paelopatides48670 | PROLYL HYDROXYLASE-RELATED |
Paelopatides48671 | N-TERMINAL ASPARAGINE AMIDOHYDROLASE |
Paelopatides48672 | PUTATIVE-RELATED |
Paelopatides48673 | |
Paelopatides48674 | DPY-19-LIKE 1, LIKE (H. SAPIENS) |
Paelopatides48675 | SERINE/THREONINE-PROTEIN KINASE |
Paelopatides48676 | |
Paelopatides48677 | DOUBLECORTIN DOMAIN CONTAINING 2 |
Paelopatides48678 | |
Paelopatides48679 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides48681 | UNCHARACTERIZED |
Paelopatides48682 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides48683 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides48684 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides48685 | |
Paelopatides48686 | |
Paelopatides48687 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
Paelopatides48688 | |
Paelopatides48689 | |
Paelopatides48690 | UNCHARACTERIZED |
Paelopatides48691 | PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE |
Paelopatides48692 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
Paelopatides48693 | PROTEIN CBG26694 |
Paelopatides48694 | PROTEIN CBG26694 |
Paelopatides48695 | IP13529P |
Paelopatides48696 | |
Paelopatides48697 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Paelopatides48698 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides48699 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
Paelopatides48700 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Paelopatides48701 | |
Paelopatides48703 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
Paelopatides48707 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides48708 | UNCHARACTERIZED |
Paelopatides48709 | TEX2 PROTEIN-RELATED |
Paelopatides48711 | |
Paelopatides48712 | |
Paelopatides48713 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Paelopatides48714 | |
Paelopatides48715 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
Paelopatides48716 | |
Paelopatides48717 | NEUROTRANSMITTER GATED ION CHANNEL |