The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides48536 | CYTOCHROME P450 508A4-RELATED |
| Paelopatides48537 | CYTOSOLIC REGULATOR PIANISSIMO |
| Paelopatides48538 | - |
| Paelopatides48539 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48540 | TYROSINE-PROTEIN KINASE |
| Paelopatides48541 | |
| Paelopatides48542 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides48543 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| Paelopatides48544 | PROTEIN, PUTATIVE-RELATED |
| Paelopatides48545 | |
| Paelopatides48546 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48547 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| Paelopatides48548 | |
| Paelopatides48549 | ATP-BINDING CASSETTE SUB-FAMILY C |
| Paelopatides48550 | ATP-BINDING CASSETTE SUB-FAMILY C |
| Paelopatides48551 | |
| Paelopatides48552 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides48553 | |
| Paelopatides48554 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Paelopatides48555 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides48556 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides48557 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
| Paelopatides48558 | |
| Paelopatides48559 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| Paelopatides48560 | FI18240P1-RELATED |
| Paelopatides48561 | |
| Paelopatides48562 | |
| Paelopatides48563 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48576 | |
| Paelopatides48577 | ADAPTIN, ALPHA/GAMMA/EPSILON |
| Paelopatides48578 | ADAPTIN, ALPHA/GAMMA/EPSILON |
| Paelopatides48579 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
| Paelopatides48580 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
| Paelopatides48581 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48582 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides48583 | N-LYSINE METHYLTRANSFERASE KMT5A |
| Paelopatides48584 | SEC61 SUBUNIT BETA |
| Paelopatides48585 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
| Paelopatides48586 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
| Paelopatides48587 | TRANSMEMBRANE PROTEIN 237 |
| Paelopatides48588 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
| Paelopatides48589 | REVERSE TRANSCRIPTASES |
| Paelopatides48590 | |
| Paelopatides48591 | |
| Paelopatides48592 | GEO11136P1-RELATED |
| Paelopatides48593 | |
| Paelopatides48594 | |
| Paelopatides48595 | SIDEROFLEXIN |
| Paelopatides48601 | |
| Paelopatides48602 |
