The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides48332 | |
| Paelopatides48333 | |
| Paelopatides48334 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides48335 | CYSTEINE-RICH PROTEIN CRIP FAMILY MEMBER |
| Paelopatides48336 | SEC24-RELATED PROTEIN |
| Paelopatides48337 | |
| Paelopatides48338 | |
| Paelopatides48339 | |
| Paelopatides48340 | |
| Paelopatides48341 | |
| Paelopatides48342 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48343 | ENDONUCLEASE-RELATED |
| Paelopatides48344 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
| Paelopatides48345 | PROTEIN CBG26694 |
| Paelopatides48346 | PROTEIN CBG26694 |
| Paelopatides48347 | FAS-ASSOCIATED PROTEIN |
| Paelopatides48348 | |
| Paelopatides48349 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48350 | |
| Paelopatides48351 | 14-3-3 PROTEIN |
| Paelopatides48352 | 14-3-3 PROTEIN |
| Paelopatides48353 | 14-3-3 PROTEIN |
| Paelopatides48354 | PROTEIN CBG26694 |
| Paelopatides48355 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides48356 | POTASSIUM CHANNEL, SUBFAMILY K |
| Paelopatides48357 | RING FINGER DOMAIN-CONTAINING |
| Paelopatides48358 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
| Paelopatides48359 | EPSIN/ENT-RELATED |
| Paelopatides48360 | |
| Paelopatides48361 | METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE |
| Paelopatides48362 | 28S RIBOSOMAL PROTEIN S26, MITOCHONDRIAL |
| Paelopatides48363 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48364 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
| Paelopatides48365 | CHAPERONIN |
| Paelopatides48366 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
| Paelopatides48367 | |
| Paelopatides48368 | |
| Paelopatides48369 | |
| Paelopatides48370 | |
| Paelopatides48371 | TNF RECEPTOR ASSOCIATED FACTOR |
| Paelopatides48372 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| Paelopatides48373 | RED PROTEIN IK FACTOR CYTOKINE IK |
| Paelopatides48374 | UNCHARACTERIZED |
| Paelopatides48375 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| Paelopatides48376 | SH3 DOMAIN-BINDING PROTEIN 5 |
| Paelopatides48378 | PROTEIN CBG26694 |
| Paelopatides48379 | SH3 DOMAIN-BINDING PROTEIN 5 |
| Paelopatides48380 | SEGMENT POLARITY PROTEIN DISHEVELLED |
| Paelopatides48382 | PROTEIN CBG03580 |
| Paelopatides48383 | D-GLUCURONYL C5-EPIMERASE |
