The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides48018 | DYNEIN INTERMEDIATE CHAIN |
| Paelopatides48019 | |
| Paelopatides48020 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48021 | REVERSE TRANSCRIPTASES |
| Paelopatides48022 | |
| Paelopatides48023 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48024 | PROTEIN CBG26694 |
| Paelopatides48025 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| Paelopatides48026 | COUNTIN RECEPTOR CNR3-RELATED |
| Paelopatides48027 | POL PROTEIN |
| Paelopatides48028 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides48029 | BUCENTAUR RELATED |
| Paelopatides48030 | OPSIN |
| Paelopatides48031 | G PROTEIN-COUPLED RECEPTOR |
| Paelopatides48032 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides48033 | |
| Paelopatides48034 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
| Paelopatides48035 | |
| Paelopatides48036 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48037 | |
| Paelopatides48038 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides48039 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides48040 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides48041 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides48042 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48043 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides48044 | SULFATE TRANSPORTER |
| Paelopatides48045 | |
| Paelopatides48046 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48047 | PROTEIN CBG26694 |
| Paelopatides48048 | PROTEIN CBG26694 |
| Paelopatides48049 | PROTEIN CBG04600 |
| Paelopatides48050 | |
| Paelopatides48051 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48052 | VESICLE-TRAFFICKING PROTEIN SEC22B |
| Paelopatides48053 | UNCHARACTERIZED |
| Paelopatides48054 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| Paelopatides48055 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
| Paelopatides48056 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
| Paelopatides48057 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
| Paelopatides48058 | |
| Paelopatides48059 | |
| Paelopatides48060 | |
| Paelopatides48061 | |
| Paelopatides48062 | |
| Paelopatides48063 | MULTICOPPER OXIDASE-RELATED |
| Paelopatides48064 | STEREOCILIN RELATED |
| Paelopatides48065 | |
| Paelopatides48066 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| Paelopatides48067 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
