The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides47762 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47763 | PROTEIN CBG26694 |
| Paelopatides47764 | |
| Paelopatides47765 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
| Paelopatides47766 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47767 | |
| Paelopatides47768 | |
| Paelopatides47769 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47770 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides47771 | EXPRESSED PROTEIN |
| Paelopatides47772 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides47773 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
| Paelopatides47774 | |
| Paelopatides47775 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides47776 | |
| Paelopatides47777 | |
| Paelopatides47778 | PROTEIN CBG26694 |
| Paelopatides47779 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides47780 | UNCHARACTERIZED |
| Paelopatides47781 | |
| Paelopatides47782 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
| Paelopatides47783 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides47784 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
| Paelopatides47785 | CXXC-TYPE ZINC FINGER PROTEIN 1 |
| Paelopatides47786 | |
| Paelopatides47787 | |
| Paelopatides47788 | PROTEIN CBG26694 |
| Paelopatides47789 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides47790 | GEM-ASSOCIATED PROTEIN 6 |
| Paelopatides47791 | N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETYLASE |
| Paelopatides47792 | MYOTUBULARIN-RELATED |
| Paelopatides47793 | |
| Paelopatides47794 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47795 | TYROSINE-PROTEIN KINASE |
| Paelopatides47796 | |
| Paelopatides47797 | |
| Paelopatides47798 | PROTEIN CBG26694 |
| Paelopatides47799 | BONUS, ISOFORM C-RELATED |
| Paelopatides47800 | |
| Paelopatides47801 | |
| Paelopatides47802 | PROTEIN SIDEKICK |
| Paelopatides47803 | PROTEIN CBG26694 |
| Paelopatides47804 | PROTEIN CBG26694 |
| Paelopatides47805 | HELICASE WITH DEATH DOMAIN-RELATED |
| Paelopatides47806 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides47807 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47808 | |
| Paelopatides47809 | |
| Paelopatides47810 | PROTEIN CBG26694 |
| Paelopatides47811 | BEN DOMAIN-CONTAINING PROTEIN 6 |
