The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides47606 | CUE DOMAIN CONTAINING PROTEIN 1 |
Paelopatides47607 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47608 | CELL CYCLE CHECKPOINT PROTEIN RAD1 |
Paelopatides47609 | NEUROTRANSMITTER GATED ION CHANNEL |
Paelopatides47610 | RETROTRANSPOSON |
Paelopatides47611 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides47612 | UNCHARACTERIZED |
Paelopatides47613 | SOLUTE CARRIER FAMILY 25 MEMBER 44 |
Paelopatides47614 | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 |
Paelopatides47615 | |
Paelopatides47616 | |
Paelopatides47617 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
Paelopatides47618 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides47619 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides47620 | |
Paelopatides47621 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides47622 | |
Paelopatides47623 | EXODEOXYRIBONUCLEASE III |
Paelopatides47624 | 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)] |
Paelopatides47625 | |
Paelopatides47626 | PROTEIN CBG26694 |
Paelopatides47627 | MACROGLOBULIN / COMPLEMENT |
Paelopatides47628 | |
Paelopatides47629 | FORKHEAD BOX PROTEIN O |
Paelopatides47630 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides47633 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides47634 | INTERFERON ALPHA-INDUCIBLE PROTEIN 27 |
Paelopatides47635 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides47636 | PROTEIN CBG26694 |
Paelopatides47637 | |
Paelopatides47638 | |
Paelopatides47639 | |
Paelopatides47640 | |
Paelopatides47641 | PHOSPHATIDYLCHOLINE TRANSFER PROTEIN |
Paelopatides47642 | NADP-SPECIFIC ISOCITRATE DEHYDROGENASE |
Paelopatides47643 | NADP-SPECIFIC ISOCITRATE DEHYDROGENASE |
Paelopatides47644 | PR DOMAIN ZINC FINGER PROTEIN |
Paelopatides47645 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47646 | BUCENTAUR RELATED |
Paelopatides47647 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Paelopatides47648 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47649 | PROTEIN ZERKNUELLT 1-RELATED |
Paelopatides47650 | BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2 |
Paelopatides47651 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides47652 | BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2 |
Paelopatides47653 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides47654 | |
Paelopatides47655 | |
Paelopatides47656 | PROTEIN LIN-7 HOMOLOG |
Paelopatides47657 | UNCHARACTERIZED |