About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47606CUE DOMAIN CONTAINING PROTEIN 1
Paelopatides47607PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides47608CELL CYCLE CHECKPOINT PROTEIN RAD1
Paelopatides47609NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides47610RETROTRANSPOSON
Paelopatides47611PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides47612UNCHARACTERIZED
Paelopatides47613SOLUTE CARRIER FAMILY 25 MEMBER 44
Paelopatides47614CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7
Paelopatides47615
Paelopatides47616
Paelopatides4761726S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2
Paelopatides47618FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides47619FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides47620
Paelopatides47621CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47622
Paelopatides47623EXODEOXYRIBONUCLEASE III
Paelopatides4762415-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)]
Paelopatides47625
Paelopatides47626PROTEIN CBG26694
Paelopatides47627MACROGLOBULIN / COMPLEMENT
Paelopatides47628
Paelopatides47629FORKHEAD BOX PROTEIN O
Paelopatides47630NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides47633INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides47634INTERFERON ALPHA-INDUCIBLE PROTEIN 27
Paelopatides47635INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47636PROTEIN CBG26694
Paelopatides47637
Paelopatides47638
Paelopatides47639
Paelopatides47640
Paelopatides47641PHOSPHATIDYLCHOLINE TRANSFER PROTEIN
Paelopatides47642NADP-SPECIFIC ISOCITRATE DEHYDROGENASE
Paelopatides47643NADP-SPECIFIC ISOCITRATE DEHYDROGENASE
Paelopatides47644PR DOMAIN ZINC FINGER PROTEIN
Paelopatides47645REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47646BUCENTAUR RELATED
Paelopatides47647BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Paelopatides47648ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides47649PROTEIN ZERKNUELLT 1-RELATED
Paelopatides47650BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
Paelopatides47651PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides47652BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
Paelopatides47653PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides47654
Paelopatides47655
Paelopatides47656PROTEIN LIN-7 HOMOLOG
Paelopatides47657UNCHARACTERIZED
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