About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47711PROTEIN CBG26694
Paelopatides47712
Paelopatides47713IP01015P-RELATED
Paelopatides47714
Paelopatides47715
Paelopatides47716ENDONUCLEASE-RELATED
Paelopatides47717
Paelopatides47718BEN DOMAIN-CONTAINING PROTEIN 5
Paelopatides47719SOLUBLE NSF ATTACHMENT PROTEIN SNAP
Paelopatides47720
Paelopatides47721CGI-140
Paelopatides47722EXPRESSED PROTEIN
Paelopatides47723MULTI-COPPER OXIDASE
Paelopatides47724
Paelopatides47725
Paelopatides47726AP COMPLEX SUBUNIT MU
Paelopatides47727PROTEIN CBG26694
Paelopatides47728
Paelopatides47729TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1
Paelopatides47730TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1
Paelopatides47731SCAVENGER RECEPTOR DOMAIN-CONTAINING
Paelopatides477322-HACID_DH_C DOMAIN-CONTAINING PROTEIN
Paelopatides477332-HYDROXYACID DEHYDROGENASE-RELATED
Paelopatides47734
Paelopatides47735REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47737METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides47738NUCLEOSIDE DIPHOSPHATE KINASE
Paelopatides47739TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13
Paelopatides47740IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED
Paelopatides47741REVERSE TRANSCRIPTASES
Paelopatides47742UNCHARACTERIZED
Paelopatides47743
Paelopatides47744F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47745VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG
Paelopatides47746B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides47747TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides47748ENDONUCLEASE-RELATED
Paelopatides47749
Paelopatides47750APPLE DOMAIN-CONTAINING PROTEIN
Paelopatides47751REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47752
Paelopatides47753TYROSINE-PROTEIN KINASE
Paelopatides47754EPM2A-INTERACTING PROTEIN 1
Paelopatides47755REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47756
Paelopatides47757ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides47758
Paelopatides47759
Paelopatides47760PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides47761PHD-TYPE DOMAIN-CONTAINING PROTEIN
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