About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47495TPR REPEAT CONTAINING PROTEIN
Paelopatides47496
Paelopatides47497PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
Paelopatides47498
Paelopatides47499DYNEIN REGULATORY COMPLEX PROTEIN 8
Paelopatides47500
Paelopatides47501REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47502ENOYL-COA HYDRATASE
Paelopatides47503
Paelopatides47504
Paelopatides47505
Paelopatides47506GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides47507
Paelopatides47508
Paelopatides47509
Paelopatides47510BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA
Paelopatides47511REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47512POL PROTEIN
Paelopatides47513ENDONUCLEASE-RELATED
Paelopatides47514
Paelopatides47515
Paelopatides47516CARBOXYLESTERASE
Paelopatides47517
Paelopatides47518ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides47519ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Paelopatides47520
Paelopatides47521TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Paelopatides47522GLYCOLIPID TRANSFER PROTEIN-RELATED
Paelopatides47523ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides47524GUANYLATE BINDING PROTEIN
Paelopatides47525ACROSIN-RELATED
Paelopatides47526CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47527PROTEASOME INHIBITOR
Paelopatides47528AQUAPORIN TRANSPORTER
Paelopatides47529
Paelopatides47530AUTOSOMAL HIGHLY CONSERVED PROTEIN
Paelopatides47531
Paelopatides47532CYTOCHROME P450 FAMILY 4
Paelopatides47533
Paelopatides47534
Paelopatides47535
Paelopatides47536
Paelopatides47537REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47538MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER
Paelopatides47539POL PROTEIN
Paelopatides47540
Paelopatides47549KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Paelopatides47550
Paelopatides47551
Paelopatides47552
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