The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides47185 | |
| Paelopatides47186 | |
| Paelopatides47187 | |
| Paelopatides47188 | COUNTIN RECEPTOR CNR3-RELATED |
| Paelopatides47189 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
| Paelopatides47190 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
| Paelopatides47191 | ZINC FINGER PROTEIN ZIC AND GLI |
| Paelopatides47192 | |
| Paelopatides47193 | |
| Paelopatides47194 | - |
| Paelopatides47195 | PROTEIN CBG26694 |
| Paelopatides47196 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides47197 | |
| Paelopatides47198 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides47199 | |
| Paelopatides47200 | DIMETHYLANILINE MONOOXYGENASE |
| Paelopatides47201 | |
| Paelopatides47202 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| Paelopatides47203 | |
| Paelopatides47204 | |
| Paelopatides47205 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
| Paelopatides47206 | SLR5058 PROTEIN |
| Paelopatides47207 | NETRIN RECEPTOR UNC5 |
| Paelopatides47208 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides47209 | |
| Paelopatides47210 | |
| Paelopatides47211 | |
| Paelopatides47212 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides47213 | SEPIAPTERIN REDUCTASE |
| Paelopatides47214 | PARANEOPLASTIC ANTIGEN |
| Paelopatides47215 | - |
| Paelopatides47216 | POLYPHOSPHOINOSITIDE PHOSPHATASE |
| Paelopatides47217 | CHOLESTEROL OXIDASE |
| Paelopatides47218 | ENDONUCLEASE-RELATED |
| Paelopatides47219 | |
| Paelopatides47220 | E3 UBIQUITIN-PROTEIN LIGASE KCMF1 |
| Paelopatides47221 | |
| Paelopatides47222 | PROTEIN CBG26694 |
| Paelopatides47223 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| Paelopatides47224 | T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN |
| Paelopatides47225 | PROTEIN CBG26694 |
| Paelopatides47226 | ENDONUCLEASE-RELATED |
| Paelopatides47227 | CORONIN |
| Paelopatides47228 | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE |
| Paelopatides47229 | SNF2/RAD54 FAMILY MEMBER |
| Paelopatides47230 | SNF2/RAD54 FAMILY MEMBER |
| Paelopatides47231 | 39S RIBOSOMAL PROTEIN L53, MITOCHONDRIAL |
| Paelopatides47232 | CORRINOID ADENOSYLTRANSFERASE |
| Paelopatides47233 | |
| Paelopatides47234 | RPE-SPONDIN |
