The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides46984 | NETRIN RECEPTOR UNC5 |
Paelopatides46985 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides46986 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides46987 | |
Paelopatides46988 | WD-REPEATCONTAINING PROTEIN WDR1 |
Paelopatides46989 | WD-REPEATCONTAINING PROTEIN WDR1 |
Paelopatides46990 | |
Paelopatides46991 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2A |
Paelopatides46992 | PROPERDIN |
Paelopatides46993 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides46994 | |
Paelopatides46995 | PEPTIDASE |
Paelopatides46996 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides46997 | |
Paelopatides46998 | TYROSYL-DNA PHOSPHODIESTERASE 1 |
Paelopatides46999 | PROTEIN CBG26694 |
Paelopatides47000 | |
Paelopatides47001 | B9 DOMAIN-CONTAINING |
Paelopatides47002 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides47003 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
Paelopatides47004 | |
Paelopatides47005 | CYTOCHROME C OXIDASE ASSEMBLY FACTOR 4 HOMOLOG, MITOCHONDRIAL |
Paelopatides47006 | |
Paelopatides47007 | D-TYROSYL-TRNA TYR DEACYLASE |
Paelopatides47008 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides47009 | PROTEIN CBG26694 |
Paelopatides47010 | |
Paelopatides47011 | |
Paelopatides47012 | ENDONUCLEASE-RELATED |
Paelopatides47013 | PUTATIVE-RELATED |
Paelopatides47014 | |
Paelopatides47015 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides47016 | RETROTRANSPOSON |
Paelopatides47017 | RETROTRANSPOSON |
Paelopatides47018 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47019 | SOLUTE CARRIER FAMILY 25 |
Paelopatides47020 | REVERSE TRANSCRIPTASE |
Paelopatides47021 | TRANSPOSASE, PUTATIVE-RELATED |
Paelopatides47022 | SD08549P |
Paelopatides47023 | |
Paelopatides47024 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47025 | |
Paelopatides47026 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides47027 | AP ENDONUCLEASE |
Paelopatides47028 | SMALL VCP/P97-INTERACTING PROTEIN |
Paelopatides47029 | BUCENTAUR RELATED |
Paelopatides47030 | ANTIGEN BSP, PUTATIVE-RELATED |
Paelopatides47031 | ADENYLYL CYCLASE-ASSOCIATED PROTEIN |
Paelopatides47032 | AAA DOMAIN-CONTAINING |
Paelopatides47033 | AAA DOMAIN-CONTAINING |