About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46984NETRIN RECEPTOR UNC5
Paelopatides46985ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides46986ENZYMATIC POLYPROTEIN-RELATED
Paelopatides46987
Paelopatides46988WD-REPEATCONTAINING PROTEIN WDR1
Paelopatides46989WD-REPEATCONTAINING PROTEIN WDR1
Paelopatides46990
Paelopatides46991EUKARYOTIC TRANSLATION INITIATION FACTOR 2A
Paelopatides46992PROPERDIN
Paelopatides46993PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides46994
Paelopatides46995PEPTIDASE
Paelopatides46996CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46997
Paelopatides46998TYROSYL-DNA PHOSPHODIESTERASE 1
Paelopatides46999PROTEIN CBG26694
Paelopatides47000
Paelopatides47001B9 DOMAIN-CONTAINING
Paelopatides47002PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides47003ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER
Paelopatides47004
Paelopatides47005CYTOCHROME C OXIDASE ASSEMBLY FACTOR 4 HOMOLOG, MITOCHONDRIAL
Paelopatides47006
Paelopatides47007D-TYROSYL-TRNA TYR DEACYLASE
Paelopatides47008INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides47009PROTEIN CBG26694
Paelopatides47010
Paelopatides47011
Paelopatides47012ENDONUCLEASE-RELATED
Paelopatides47013PUTATIVE-RELATED
Paelopatides47014
Paelopatides47015PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides47016RETROTRANSPOSON
Paelopatides47017RETROTRANSPOSON
Paelopatides47018REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47019SOLUTE CARRIER FAMILY 25
Paelopatides47020REVERSE TRANSCRIPTASE
Paelopatides47021TRANSPOSASE, PUTATIVE-RELATED
Paelopatides47022SD08549P
Paelopatides47023
Paelopatides47024REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47025
Paelopatides47026ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides47027AP ENDONUCLEASE
Paelopatides47028SMALL VCP/P97-INTERACTING PROTEIN
Paelopatides47029BUCENTAUR RELATED
Paelopatides47030ANTIGEN BSP, PUTATIVE-RELATED
Paelopatides47031ADENYLYL CYCLASE-ASSOCIATED PROTEIN
Paelopatides47032AAA DOMAIN-CONTAINING
Paelopatides47033AAA DOMAIN-CONTAINING
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