The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides47135 | M-PHASE PHOSPHOPROTEIN 6 |
| Paelopatides47136 | KINESIN-LIKE PROTEIN KLP-3 |
| Paelopatides47137 | KINESIN-LIKE PROTEIN KLP-3 |
| Paelopatides47138 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
| Paelopatides47139 | LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED |
| Paelopatides47140 | IMPACT-RELATED |
| Paelopatides47141 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides47142 | |
| Paelopatides47143 | |
| Paelopatides47144 | |
| Paelopatides47145 | |
| Paelopatides47146 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47147 | |
| Paelopatides47148 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
| Paelopatides47149 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
| Paelopatides47150 | - |
| Paelopatides47151 | GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5 |
| Paelopatides47152 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides47153 | PROTEIN CBG26694 |
| Paelopatides47154 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides47155 | NETRIN RECEPTOR UNC5 |
| Paelopatides47156 | NETRIN RECEPTOR UNC5 |
| Paelopatides47157 | |
| Paelopatides47158 | BONUS, ISOFORM C-RELATED |
| Paelopatides47159 | THAP DOMAIN-CONTAINING PROTEIN 6 |
| Paelopatides47160 | BONUS, ISOFORM C-RELATED |
| Paelopatides47161 | BONUS, ISOFORM C-RELATED |
| Paelopatides47162 | |
| Paelopatides47163 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides47164 | GLUTATHIONE S-TRANSFERASE |
| Paelopatides47165 | GLUTATHIONE S-TRANSFERASE |
| Paelopatides47166 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides47167 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47168 | GAG-RELATED PROTEIN |
| Paelopatides47169 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7 |
| Paelopatides47170 | METALLOPROTEASE INHIBITOR |
| Paelopatides47171 | STEERIN |
| Paelopatides47172 | |
| Paelopatides47173 | SERINE PROTEASE |
| Paelopatides47174 | |
| Paelopatides47175 | STEERIN |
| Paelopatides47176 | |
| Paelopatides47177 | GUANYLYL CYCLASE |
| Paelopatides47178 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47179 | |
| Paelopatides47180 | THAP DOMAIN PROTEIN |
| Paelopatides47181 | |
| Paelopatides47182 | HYDROXYSTEROID DEHYDROGENASE 1M |
| Paelopatides47183 | TELO2-INTERACTING PROTEIN 2 |
| Paelopatides47184 |
