The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides47235 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
Paelopatides47236 | BICD FAMILY-LIKE CARGO ADAPTER |
Paelopatides47237 | PROTEIN ABHD11 |
Paelopatides47238 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47239 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
Paelopatides47240 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
Paelopatides47241 | |
Paelopatides47242 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Paelopatides47243 | |
Paelopatides47244 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
Paelopatides47245 | |
Paelopatides47246 | BOMBESIN RECEPTOR-ACTIVATED PROTEIN C6ORF89 |
Paelopatides47247 | MYOTROPHIN |
Paelopatides47248 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides47249 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47250 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides47251 | |
Paelopatides47252 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47253 | |
Paelopatides47254 | BUCENTAUR RELATED |
Paelopatides47255 | |
Paelopatides47256 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
Paelopatides47257 | SORTING NEXIN |
Paelopatides47258 | |
Paelopatides47259 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47260 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47261 | PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4 |
Paelopatides47262 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 22 |
Paelopatides47263 | PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4 |
Paelopatides47264 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47265 | PROTEIN DIAPHANOUS |
Paelopatides47266 | |
Paelopatides47267 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides47268 | CELL SURFACE GLYCOPROTEIN MUC18-RELATED |
Paelopatides47269 | |
Paelopatides47270 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
Paelopatides47271 | PROLIFERATING CELL NUCLEAR ANTIGEN |
Paelopatides47272 | UPF0561 PROTEIN C2ORF68 |
Paelopatides47273 | |
Paelopatides47274 | PALMITOYLTRANSFERASE ZDHHC16 |
Paelopatides47275 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides47276 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides47277 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides47278 | |
Paelopatides47279 | TYROSINE-PROTEIN KINASE |
Paelopatides47280 | ACETYL-COA C-ACYLTRANSFERASE |
Paelopatides47281 | SAP18 |
Paelopatides47282 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
Paelopatides47283 | |
Paelopatides47284 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |