About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47235MYOTONIC DYSTROPHY S/T KINASE-RELATED
Paelopatides47236BICD FAMILY-LIKE CARGO ADAPTER
Paelopatides47237PROTEIN ABHD11
Paelopatides47238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47239OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides47240OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides47241
Paelopatides47242UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides47243
Paelopatides47244FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED
Paelopatides47245
Paelopatides47246BOMBESIN RECEPTOR-ACTIVATED PROTEIN C6ORF89
Paelopatides47247MYOTROPHIN
Paelopatides47248ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47249REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47250SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47251
Paelopatides47252REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47253
Paelopatides47254BUCENTAUR RELATED
Paelopatides47255
Paelopatides47256RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Paelopatides47257SORTING NEXIN
Paelopatides47258
Paelopatides47259REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47260REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47261PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4
Paelopatides47262ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 22
Paelopatides47263PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4
Paelopatides47264ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides47265PROTEIN DIAPHANOUS
Paelopatides47266
Paelopatides47267PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides47268CELL SURFACE GLYCOPROTEIN MUC18-RELATED
Paelopatides47269
Paelopatides47270EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
Paelopatides47271PROLIFERATING CELL NUCLEAR ANTIGEN
Paelopatides47272UPF0561 PROTEIN C2ORF68
Paelopatides47273
Paelopatides47274PALMITOYLTRANSFERASE ZDHHC16
Paelopatides47275CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47276CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47277PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides47278
Paelopatides47279TYROSINE-PROTEIN KINASE
Paelopatides47280ACETYL-COA C-ACYLTRANSFERASE
Paelopatides47281SAP18
Paelopatides47282T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Paelopatides47283
Paelopatides47284PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
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