The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides47337 | |
Paelopatides47338 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides47339 | PARANEOPLASTIC ANTIGEN |
Paelopatides47340 | PEROXISOMAL SARCOSINE OXIDASE |
Paelopatides47341 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47342 | PEROXISOMAL SARCOSINE OXIDASE |
Paelopatides47343 | 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)] |
Paelopatides47344 | 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)] |
Paelopatides47345 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides47346 | |
Paelopatides47347 | GAG-RELATED PROTEIN |
Paelopatides47348 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides47349 | TRANSPOSON |
Paelopatides47350 | |
Paelopatides47351 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47352 | IP13529P |
Paelopatides47353 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47354 | GUANYLYL CYCLASE |
Paelopatides47355 | SIGNAL RECOGNITION PARTICLE 72 |
Paelopatides47356 | |
Paelopatides47361 | |
Paelopatides47362 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides47363 | ORIGIN RECOGNITION COMPLEX SUBUNIT 2 |
Paelopatides47364 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides47365 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides47366 | ORIGIN RECOGNITION COMPLEX SUBUNIT 2 |
Paelopatides47367 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47368 | UNCHARACTERIZED |
Paelopatides47369 | STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE |
Paelopatides47370 | PROTEIN GAMETE EXPRESSED 1 |
Paelopatides47371 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47372 | |
Paelopatides47373 | |
Paelopatides47374 | TRANSPOSABLE ELEMENT-RELATED |
Paelopatides47375 | TRANSPOSABLE ELEMENT-RELATED |
Paelopatides47376 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
Paelopatides47377 | |
Paelopatides47378 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides47379 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides47380 | CENTROSOMAL PROTEIN-RELATED |
Paelopatides47381 | |
Paelopatides47382 | CENTROSOMAL PROTEIN-RELATED |
Paelopatides47383 | |
Paelopatides47384 | DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1, ISOFORM A-RELATED |
Paelopatides47385 | |
Paelopatides47386 | TRANSPOSASE, PUTATIVE-RELATED |
Paelopatides47387 | PROTEIN CBG26694 |
Paelopatides47388 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides47389 | |
Paelopatides47390 |