About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47085BUCENTAUR RELATED
Paelopatides47086HMG DOMAIN-CONTAINING PROTEIN 3
Paelopatides47087IP13529P
Paelopatides47088IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
Paelopatides47089UNCHARACTERIZED
Paelopatides47090CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47091
Paelopatides47092UNCHARACTERIZED
Paelopatides47093PROTEIN CBG26694
Paelopatides47094DNA-DIRECTED RNA POLYMERASE
Paelopatides47095PARANEOPLASTIC ANTIGEN
Paelopatides47096POL PROTEIN
Paelopatides47097PROTEIN CBG26694
Paelopatides47098PROTEIN CBG26694
Paelopatides47099ENDONUCLEASE-RELATED
Paelopatides47100PROTEIN CBG26694
Paelopatides47101PROTEIN CBG26694
Paelopatides47102G-PROTEIN COUPLED RECEPTOR 158-RELATED
Paelopatides47103DISCS LARGE
Paelopatides47104PEPTIDYLPROLYL ISOMERASE
Paelopatides47105DET1- AND DDB1-ASSOCIATED PROTEIN 1
Paelopatides47106EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides47107
Paelopatides47108PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides47109
Paelopatides47110THIAMINE PYROPHOSPHATE ENZYMES
Paelopatides47111THIAMINE PYROPHOSPHATE ENZYMES
Paelopatides47112THIAMINE PYROPHOSPHATE ENZYMES
Paelopatides47113PROTEIN CBG26694
Paelopatides47114PROTEIN CBG26694
Paelopatides47115UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides47116
Paelopatides47117
Paelopatides47118EPM2A-INTERACTING PROTEIN 1
Paelopatides47119UNCHARACTERIZED
Paelopatides47120
Paelopatides47121
Paelopatides47122ENZYMATIC POLYPROTEIN-RELATED
Paelopatides47123ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides47124ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides47125VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides47126SPERIOLIN-BINDING FACTOR
Paelopatides47127E3 UBIQUITIN-PROTEIN LIGASE TRIM
Paelopatides47128RETINAL PROTEIN 4
Paelopatides47129PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides47130COILED-COIL DOMAIN-CONTAINING PROTEIN 150
Paelopatides47131
Paelopatides47132AP ENDONUCLEASE
Paelopatides47133ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides47134REVERSE TRANSCRIPTASES
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