The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides47085 | BUCENTAUR RELATED |
Paelopatides47086 | HMG DOMAIN-CONTAINING PROTEIN 3 |
Paelopatides47087 | IP13529P |
Paelopatides47088 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
Paelopatides47089 | UNCHARACTERIZED |
Paelopatides47090 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides47091 | |
Paelopatides47092 | UNCHARACTERIZED |
Paelopatides47093 | PROTEIN CBG26694 |
Paelopatides47094 | DNA-DIRECTED RNA POLYMERASE |
Paelopatides47095 | PARANEOPLASTIC ANTIGEN |
Paelopatides47096 | POL PROTEIN |
Paelopatides47097 | PROTEIN CBG26694 |
Paelopatides47098 | PROTEIN CBG26694 |
Paelopatides47099 | ENDONUCLEASE-RELATED |
Paelopatides47100 | PROTEIN CBG26694 |
Paelopatides47101 | PROTEIN CBG26694 |
Paelopatides47102 | G-PROTEIN COUPLED RECEPTOR 158-RELATED |
Paelopatides47103 | DISCS LARGE |
Paelopatides47104 | PEPTIDYLPROLYL ISOMERASE |
Paelopatides47105 | DET1- AND DDB1-ASSOCIATED PROTEIN 1 |
Paelopatides47106 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides47107 | |
Paelopatides47108 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Paelopatides47109 | |
Paelopatides47110 | THIAMINE PYROPHOSPHATE ENZYMES |
Paelopatides47111 | THIAMINE PYROPHOSPHATE ENZYMES |
Paelopatides47112 | THIAMINE PYROPHOSPHATE ENZYMES |
Paelopatides47113 | PROTEIN CBG26694 |
Paelopatides47114 | PROTEIN CBG26694 |
Paelopatides47115 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Paelopatides47116 | |
Paelopatides47117 | |
Paelopatides47118 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides47119 | UNCHARACTERIZED |
Paelopatides47120 | |
Paelopatides47121 | |
Paelopatides47122 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides47123 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Paelopatides47124 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Paelopatides47125 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Paelopatides47126 | SPERIOLIN-BINDING FACTOR |
Paelopatides47127 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
Paelopatides47128 | RETINAL PROTEIN 4 |
Paelopatides47129 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides47130 | COILED-COIL DOMAIN-CONTAINING PROTEIN 150 |
Paelopatides47131 | |
Paelopatides47132 | AP ENDONUCLEASE |
Paelopatides47133 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides47134 | REVERSE TRANSCRIPTASES |