About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46770
Paelopatides46771ESOPHAGEAL CANCER ASSOCIATED PROTEIN
Paelopatides46772PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides46773-
Paelopatides46774NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Paelopatides46775
Paelopatides46776CALBINDIN
Paelopatides46777FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides46778
Paelopatides46779
Paelopatides46780
Paelopatides46781
Paelopatides46782PROTEIN CBG26694
Paelopatides46783
Paelopatides46784CHROMOBOX PROTEIN
Paelopatides46785THAP DOMAIN PROTEIN
Paelopatides46786
Paelopatides46787CYCLIN D1-BINDING PROTEIN 1
Paelopatides46788
Paelopatides46789REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46790NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides46791
Paelopatides46792ASAP FAMILY MEMBER
Paelopatides46793PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Paelopatides46794ASAP FAMILY MEMBER
Paelopatides46795SER/THR PROTEIN KINASE-TRB
Paelopatides46796TRANSLATION FACTOR
Paelopatides46797PROTEIN KINASE PKN/PRK1, EFFECTOR
Paelopatides46798
Paelopatides46799PROTEIN KINASE PKN/PRK1, EFFECTOR
Paelopatides46800
Paelopatides46804
Paelopatides46805FI04643P-RELATED
Paelopatides46806AMINO ACID TRANSPORTER
Paelopatides46807ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46808AMINO ACID TRANSPORTER
Paelopatides46809
Paelopatides46810PROTEIN CBG26694
Paelopatides46811PROTEIN CBG26694
Paelopatides46812AMINO ACID TRANSPORTER
Paelopatides46813AMINO ACID TRANSPORTER
Paelopatides46814AMINO ACID TRANSPORTER
Paelopatides46815AMINO ACID TRANSPORTER
Paelopatides46816AMINO ACID TRANSPORTER
Paelopatides46817
Paelopatides46820CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46821
Paelopatides46822GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN
Paelopatides46823ENZYMATIC POLYPROTEIN-RELATED
Paelopatides46824TRANSPOSON TY3-I GAG-POL POLYPROTEIN
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